RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 KHKP50053 298 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 CASP8Q14790 479 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 P2RY6Q15077 328 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 TNFAIP8L3Q5GJ75 292 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 OGFOD2Q6N063 350 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 ZNF704Q6ZNC4 412 aaPredicted RBP18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 ANKRD46Q86W74 232 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 WFDC8Q8IUA0 241 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 GABRG1Q8N1C3 465 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 XAGE5Q8WWM1 108 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 NEURL3Q96EH8 262 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 PLPPR2Q96GM1 343 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 MEAF6Q9HAF1 191 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 BCO1Q9HAY6 547 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 NGBQ9NPG2 151 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 ACER3Q9NUN7 267 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 KCNE5Q9UJ90 142 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 WDR45Q9Y484 360 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 E9PBE3 544 aa18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 ANKRD28O15084 1053 aa18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 GCM2O75603 506 aaPredicted RBP18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 UBTFL6P0CB48 400 aaPredicted RBP18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 OR12D1P0DN82 309 aa18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 ENPP1P22413 925 aa18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 IL32P24001 234 aa18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 S100A3P33764 101 aa18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 CHI3L1P36222 383 aaPredicted RBP18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 SESN3P58005 492 aa18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 TXNL4AP83876 142 aaKnown RBP18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 HPCAP84074 193 aa18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 SPANXN4Q5MJ08 99 aa18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 SFRP5Q5T4F7 317 aa18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 AP1ARQ63HQ0 302 aa18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 SAXO2Q658L1 398 aa18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 TNFAIP8L2Q6P589 184 aaPredicted RBP18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 NUFIP2Q7Z417 695 aaKnown RBP18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 TRIML2Q8N7C3 387 aa18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 SLC25A43Q8WUT9 341 aaPredicted RBP18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 S100PBPQ96BU1 408 aa18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 OR5B2Q96R09 309 aa18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 SPIN1Q9Y657 262 aaPredicted RBP18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 PRR14LQ5THK1 2151 aa18.11■□□□□ 0.49
PDLIM4-206ENST00000474421 A0A1W2PNR3 127 aa18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 ZNF500O60304 480 aaPredicted RBP18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 FKBP2P26885 142 aaKnown RBP18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 ANXA11P50995 505 aaKnown RBP18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 CSNK2A1P68400 391 aaPredicted RBP18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 PHC1P78364 1004 aa18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 LRRC74AQ0VAA2 488 aa18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 MERTKQ12866 999 aa18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 HHATQ5VTY9 493 aa18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 TYW3Q6IPR3 259 aaKnown RBP18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 YTHDF3Q7Z739 585 aaKnown RBP18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 ZNF619Q8N2I2 560 aa18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 FAM71CQ8NEG0 241 aa18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 TMEM171Q8WVE6 324 aa18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 HSD17B8Q92506 261 aa18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 KISS1RQ969F8 398 aaPredicted RBP18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 ROPN1LQ96C74 230 aa18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 PERPQ96FX8 193 aa18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 PAIP2Q9BPZ3 127 aaKnown RBP18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 SLC35A5Q9BS91 424 aa18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 TMEM204Q9BSN7 226 aa18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 BDH2Q9BUT1 245 aa18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 GSX2Q9BZM3 304 aa18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 SAP130Q9H0E3 1048 aa18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 CXorf56Q9H5V9 222 aa18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 MARCOQ9UEW3 520 aaPredicted RBP18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 BTNL2Q9UIR0 455 aa18.1■□□□□ 0.49
PDLIM4-206ENST00000474421 HS3ST1O14792 307 aa18.09■□□□□ 0.49
PDLIM4-206ENST00000474421 CYTIPO60759 359 aa18.09■□□□□ 0.49
PDLIM4-206ENST00000474421 HOXB4P17483 251 aaPredicted RBP18.09■□□□□ 0.49
PDLIM4-206ENST00000474421 PGM1P36871 562 aa18.09■□□□□ 0.49
PDLIM4-206ENST00000474421 APOBEC1P41238 236 aaKnown RBP18.09■□□□□ 0.49
PDLIM4-206ENST00000474421 CASP9P55211 416 aa18.09■□□□□ 0.49
PDLIM4-206ENST00000474421 RASGEF1BQ0VAM2 473 aa18.09■□□□□ 0.49
PDLIM4-206ENST00000474421 BST1Q10588 318 aa18.09■□□□□ 0.49
PDLIM4-206ENST00000474421 MPP2Q14168 576 aa18.09■□□□□ 0.49
PDLIM4-206ENST00000474421 FAM174BQ3ZCQ3 159 aa18.09■□□□□ 0.49
PDLIM4-206ENST00000474421 SPATA19Q7Z5L4 167 aa18.09■□□□□ 0.49
PDLIM4-206ENST00000474421 RAB8BQ92930 207 aa18.09■□□□□ 0.49
PDLIM4-206ENST00000474421 ZNF524Q96C55 264 aa18.09■□□□□ 0.49
PDLIM4-206ENST00000474421 CCDC115Q96NT0 180 aa18.09■□□□□ 0.49
PDLIM4-206ENST00000474421 PSD2Q9BQI7 771 aa18.09■□□□□ 0.49
PDLIM4-206ENST00000474421 QRSL1Q9H0R6 528 aaKnown RBP18.09■□□□□ 0.49
PDLIM4-206ENST00000474421 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.09■□□□□ 0.49
PDLIM4-206ENST00000474421 PNPOQ9NVS9 261 aa18.09■□□□□ 0.49
PDLIM4-206ENST00000474421 IGHV3-15A0A0B4J1V0 119 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 CENPVL1A0A0U1RR11 272 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 ZNF724A8MTY0 619 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 SULT2B1O00204 365 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 H6PDO95479 791 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 ADAP00813 363 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 PAX1P15863 534 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 OR3A2P47893 321 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 ITGADQ13349 1161 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 MAPK14Q16539 360 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 GPAT3Q53EU6 434 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 SYT14P1Q58G82 188 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 CLEC9AQ6UXN8 241 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms