RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 TNFSF13O75888 250 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 CCNA2P20248 432 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 IL11P20809 199 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 CD79BP40259 229 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 SLC6A8P48029 635 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 IDH3AP50213 366 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 CRISP3P54108 245 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 SESN3P58005 492 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 KCNJ10P78508 379 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 SKP2Q13309 424 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 HSP90B2PQ58FF3 399 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 COX20Q5RI15 118 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 ALKBH2Q6NS38 261 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 LRRC74BQ6ZQY2 392 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 MSANTD1Q6ZTZ1 278 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 FCRLAQ7L513 359 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 ANKFN1Q8N957 763 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 OR6K3Q8NGY3 331 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 ST8SIA1Q92185 356 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 STARD4Q96DR4 205 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 ZHX1-C8orf76Q96EF9 292 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 MAGEB18Q96M61 343 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 TRNT1Q96Q11 434 aaKnown RBP10.33□□□□□ -0.76
CPNE1-222ENST00000473373 KLHDC3Q9BQ90 382 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 ARMC7Q9H6L4 198 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 TPT1P8Q9HAU6 139 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 SDR39U1Q9NRG7 319 aaPredicted RBP10.33□□□□□ -0.76
CPNE1-222ENST00000473373 GLRX2Q9NS18 164 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 ELOVL5Q9NYP7 299 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 JKAMPQ9P055 326 aa10.33□□□□□ -0.76
CPNE1-222ENST00000473373 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.33□□□□□ -0.76
CPNE1-222ENST00000473373 ANKHD1Q8IWZ3 2542 aaKnown RBP10.33□□□□□ -0.76
CPNE1-222ENST00000473373 FREM1Q5H8C1 2179 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 IGHV3-15A0A0B4J1V0 119 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 CENPVL1A0A0U1RR11 272 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 NPIPB9F8W1W9 429 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 SULT2B1O00204 365 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 ADAMDEC1O15204 470 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 CTAG2O75638 210 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 PRKD3O94806 890 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 DBIP07108 87 aaKnown RBP10.32□□□□□ -0.76
CPNE1-222ENST00000473373 ETFAP13804 333 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 H2AFXP16104 143 aaPredicted RBP10.32□□□□□ -0.76
CPNE1-222ENST00000473373 ENPP1P22413 925 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 DNASE1P24855 282 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 SHC1P29353 583 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 KIR2DL2P43627 348 aaPredicted RBP10.32□□□□□ -0.76
CPNE1-222ENST00000473373 IDH2P48735 452 aaKnown RBP10.32□□□□□ -0.76
CPNE1-222ENST00000473373 COPZ1P61923 177 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 CSNK2A1P68400 391 aaPredicted RBP10.32□□□□□ -0.76
CPNE1-222ENST00000473373 FAM27E3Q08E93 113 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 FUT5Q11128 374 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 LARS2Q15031 903 aaKnown RBP10.32□□□□□ -0.76
CPNE1-222ENST00000473373 RNPS1Q15287 305 aaKnown RBP10.32□□□□□ -0.76
CPNE1-222ENST00000473373 MAPK14Q16539 360 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 ZNF239Q16600 458 aaKnown RBP10.32□□□□□ -0.76
CPNE1-222ENST00000473373 CTU2Q2VPK5 515 aaKnown RBP10.32□□□□□ -0.76
CPNE1-222ENST00000473373 AGKQ53H12 422 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 SLC2A7Q6PXP3 512 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 SPNS3Q6ZMD2 512 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 ZNF610Q8N9Z0 462 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 OIT3Q8WWZ8 545 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 SPDL1Q96EA4 605 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 DNAJA3Q96EY1 480 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 AURKBQ96GD4 344 aaPredicted RBP10.32□□□□□ -0.76
CPNE1-222ENST00000473373 DACH2Q96NX9 599 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 EBF4Q9BQW3 602 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 CCDC28BQ9BUN5 200 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 OCEL1Q9H607 264 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 MTHFD2LQ9H903 347 aaPredicted RBP10.32□□□□□ -0.76
CPNE1-222ENST00000473373 NPHS2Q9NP85 383 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 RASSF1Q9NS23 344 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 THUMPD1Q9NXG2 353 aaKnown RBP10.32□□□□□ -0.76
CPNE1-222ENST00000473373 KLHL28Q9NXS3 571 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 DCTN4Q9UJW0 460 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 ZNF232Q9UNY5 417 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 TRIM33Q9UPN9 1127 aa10.32□□□□□ -0.76
CPNE1-222ENST00000473373 A0A0G2JND7 137 aa10.31□□□□□ -0.76
CPNE1-222ENST00000473373 CLDN24A6NM45 220 aa10.31□□□□□ -0.76
CPNE1-222ENST00000473373 C16orf97H3BN30 126 aa10.31□□□□□ -0.76
CPNE1-222ENST00000473373 CLIC1O00299 241 aa10.31□□□□□ -0.76
CPNE1-222ENST00000473373 SS18L1O75177 396 aaPredicted RBP10.31□□□□□ -0.76
CPNE1-222ENST00000473373 CHRM4P08173 479 aa10.31□□□□□ -0.76
CPNE1-222ENST00000473373 CD8BP10966 210 aa10.31□□□□□ -0.76
CPNE1-222ENST00000473373 PSMA4P25789 261 aaKnown RBP10.31□□□□□ -0.76
CPNE1-222ENST00000473373 PGM1P36871 562 aa10.31□□□□□ -0.76
CPNE1-222ENST00000473373 APOBEC1P41238 236 aaKnown RBP10.31□□□□□ -0.76
CPNE1-222ENST00000473373 KEAP1Q14145 624 aa10.31□□□□□ -0.76
CPNE1-222ENST00000473373 SQLEQ14534 574 aa10.31□□□□□ -0.76
CPNE1-222ENST00000473373 GTDC1Q4AE62 458 aa10.31□□□□□ -0.76
CPNE1-222ENST00000473373 LIN52Q52LA3 116 aa10.31□□□□□ -0.76
CPNE1-222ENST00000473373 MRPL2Q5T653 305 aaKnown RBP10.31□□□□□ -0.76
CPNE1-222ENST00000473373 ANKRD34AQ69YU3 496 aa10.31□□□□□ -0.76
CPNE1-222ENST00000473373 BEND4Q6ZU67 534 aa10.31□□□□□ -0.76
CPNE1-222ENST00000473373 PLEKHM3Q6ZWE6 761 aa10.31□□□□□ -0.76
CPNE1-222ENST00000473373 ZNF550Q7Z398 422 aa10.31□□□□□ -0.76
CPNE1-222ENST00000473373 GRINAQ7Z429 371 aa10.31□□□□□ -0.76
CPNE1-222ENST00000473373 CMIPQ8IY22 773 aa10.31□□□□□ -0.76
CPNE1-222ENST00000473373 ZNF440Q8IYI8 595 aa10.31□□□□□ -0.76
CPNE1-222ENST00000473373 SLC43A2Q8N370 569 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms