RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 C7orf72A4D263 438 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 TMEM247A6NEH6 219 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 GTPBP1O00178 669 aaKnown RBP11.81□□□□□ -0.52
TPM3-216ENST00000473036 WDR1O75083 606 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 PGM3O95394 542 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 T-ENOLP0DO92 83 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 PRKCAP17252 672 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 HTR1EP28566 365 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 CASP6P55212 293 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 GNA13Q14344 377 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 CTU2Q2VPK5 515 aaKnown RBP11.81□□□□□ -0.52
TPM3-216ENST00000473036 SLC25A53Q5H9E4 307 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 RABL3Q5HYI8 236 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 GCNT6Q5T4J0 391 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 MRPL2Q5T653 305 aaKnown RBP11.81□□□□□ -0.52
TPM3-216ENST00000473036 B3GNT6Q6ZMB0 384 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 EIF3MQ7L2H7 374 aaKnown RBP11.81□□□□□ -0.52
TPM3-216ENST00000473036 PGAM4Q8N0Y7 254 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 OR5W2Q8NH69 310 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 FBXO27Q8NI29 283 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 POP5Q969H6 163 aaKnown RBP11.81□□□□□ -0.52
TPM3-216ENST00000473036 ADGRG7Q96K78 797 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 WFDC6Q9BQY6 131 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 TMEM38AQ9H6F2 299 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 TMEM185BQ9H7F4 350 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 PRPF19Q9UMS4 504 aaKnown RBP11.81□□□□□ -0.52
TPM3-216ENST00000473036 RNF6Q9Y252 685 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 HCFC1P51610 2035 aa11.81□□□□□ -0.52
TPM3-216ENST00000473036 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 A0A0G2JPF8 293 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 CDHR4A6H8M9 788 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 FIGNL2A6NMB9 653 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 AHRRA9YTQ3 701 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 HNRNPCL2B2RXH8 293 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 HNRNPCL3B7ZW38 293 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 H3BML4 177 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 H3BNH8 94 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 CYP7B1O75881 506 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 TGM6O95932 706 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 DBIP07108 87 aaKnown RBP11.8□□□□□ -0.52
TPM3-216ENST00000473036 HNRNPCL4P0DMR1 293 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 PRG2P13727 222 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 NID1P14543 1247 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 ZNF17P17021 662 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 ACAA2P42765 397 aaKnown RBP11.8□□□□□ -0.52
TPM3-216ENST00000473036 CRYBA2P53672 197 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 CRISP3P54108 245 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 DLX5P56178 289 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 HPCAP84074 193 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 CDK6Q00534 326 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 QPRTQ15274 297 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 BCL2A1Q16548 175 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 GLIPR1L2Q4G1C9 344 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 SAMD4BQ5PRF9 694 aaKnown RBP11.8□□□□□ -0.52
TPM3-216ENST00000473036 C8orf82Q6P1X6 216 aaPredicted RBP11.8□□□□□ -0.52
TPM3-216ENST00000473036 AAGABQ6PD74 315 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 NET1Q7Z628 596 aaPredicted RBP11.8□□□□□ -0.52
TPM3-216ENST00000473036 CALHM3Q86XJ0 350 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 ZZZ3Q8IYH5 903 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 UBQLNLQ8IYU4 475 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 METTL25Q8N6Q8 603 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 C9orf106Q8NAJ2 232 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 OR52P1PQ8NH57 321 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 OR10A6Q8NH74 314 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 ZPLD1Q8TCW7 415 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 WDR60Q8WVS4 1066 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 OIT3Q8WWZ8 545 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 MCUR1Q96AQ8 359 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 ZBTB8AQ96BR9 441 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 ZNF845Q96IR2 970 aaPredicted RBP11.8□□□□□ -0.52
TPM3-216ENST00000473036 ECSITQ9BQ95 431 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 PIGQQ9BRB3 760 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 GPATCH1Q9BRR8 931 aaKnown RBP11.8□□□□□ -0.52
TPM3-216ENST00000473036 PIF1Q9H611 641 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.8□□□□□ -0.52
TPM3-216ENST00000473036 TAS2R1Q9NYW7 299 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 CLCF1Q9UBD9 225 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 ZNF443Q9Y2A4 671 aaPredicted RBP11.8□□□□□ -0.52
TPM3-216ENST00000473036 SLC35A3Q9Y2D2 325 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 MPDZO75970 2070 aa11.8□□□□□ -0.52
TPM3-216ENST00000473036 A0A0J9YW62 118 aa11.79□□□□□ -0.52
TPM3-216ENST00000473036 CLCA1A8K7I4 914 aa11.79□□□□□ -0.52
TPM3-216ENST00000473036 C19orf84I3L1E1 186 aa11.79□□□□□ -0.52
TPM3-216ENST00000473036 SEC14L5O43304 696 aa11.79□□□□□ -0.52
TPM3-216ENST00000473036 FRS3O43559 492 aa11.79□□□□□ -0.52
TPM3-216ENST00000473036 TPST1O60507 370 aa11.79□□□□□ -0.52
TPM3-216ENST00000473036 GMNNO75496 209 aa11.79□□□□□ -0.52
TPM3-216ENST00000473036 STAMBPO95630 424 aa11.79□□□□□ -0.52
TPM3-216ENST00000473036 GKN3PP0CG01 181 aa11.79□□□□□ -0.52
TPM3-216ENST00000473036 PEPDP12955 493 aa11.79□□□□□ -0.52
TPM3-216ENST00000473036 GABRA1P14867 456 aa11.79□□□□□ -0.52
TPM3-216ENST00000473036 IL7RP16871 459 aa11.79□□□□□ -0.52
TPM3-216ENST00000473036 SLC6A2P23975 617 aa11.79□□□□□ -0.52
TPM3-216ENST00000473036 CEACAM8P31997 349 aaPredicted RBP11.79□□□□□ -0.52
TPM3-216ENST00000473036 CCR4P51679 360 aa11.79□□□□□ -0.52
TPM3-216ENST00000473036 SUMO3P55854 103 aaPredicted RBP11.79□□□□□ -0.52
TPM3-216ENST00000473036 PCBP3P57721 371 aaKnown RBP11.79□□□□□ -0.52
TPM3-216ENST00000473036 SESN3P58005 492 aa11.79□□□□□ -0.52
TPM3-216ENST00000473036 PSME3P61289 254 aa11.79□□□□□ -0.52
TPM3-216ENST00000473036 CBFBQ13951 182 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms