RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.39□□□□□ -0.91
APTX-216ENST00000472896 PCDHGA9Q9Y5G4 932 aaKnown RBP9.39□□□□□ -0.91
APTX-216ENST00000472896 TRBV4-1A0A0J9YWV2 114 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 TMEM82A0PJX8 343 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 FAM74A7A6NL05 159 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 ANXA2P2A6NMY6 339 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 LRRN3E7EW58 273 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 RRP8O43159 456 aaKnown RBP9.38□□□□□ -0.91
APTX-216ENST00000472896 SSX5O60225 188 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 TSPAN3O60637 253 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 GALR3O60755 368 aaPredicted RBP9.38□□□□□ -0.91
APTX-216ENST00000472896 STC2O76061 302 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 RGS11O94810 467 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 OR2A4O95047 310 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 SLC25A14O95258 325 aaPredicted RBP9.38□□□□□ -0.91
APTX-216ENST00000472896 CBX7O95931 251 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 HIST1H2ABP04908 130 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 S100A8P05109 93 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 EIF4EP06730 217 aaKnown RBP9.38□□□□□ -0.91
APTX-216ENST00000472896 FABP1P07148 127 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 LIMS3P0CW19 117 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 LIMS4P0CW20 117 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 IFNGR1P15260 489 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 IDSP22304 550 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 ELAVL4P26378 380 aaKnown RBP9.38□□□□□ -0.91
APTX-216ENST00000472896 ATP5C1P36542 298 aaKnown RBP9.38□□□□□ -0.91
APTX-216ENST00000472896 RPL3P39023 403 aaKnown RBP9.38□□□□□ -0.91
APTX-216ENST00000472896 FEN1P39748 380 aaKnown RBP9.38□□□□□ -0.91
APTX-216ENST00000472896 RFC3P40938 356 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 CSKP41240 450 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 MTNR1AP48039 350 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 RNF144AP50876 292 aaPredicted RBP9.38□□□□□ -0.91
APTX-216ENST00000472896 KIAA1024LP59773 190 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 TLE3Q04726 772 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 KRT33BQ14525 404 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 TRAM1Q15629 374 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 FAM74A3Q4VXF1 159 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 GPRC6AQ5T6X5 926 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 LIPJQ5W064 366 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 SLC30A6Q6NXT4 461 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 PGBD2Q6P3X8 592 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 UQCC3Q6UW78 93 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 DEF8Q6ZN54 512 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 HIST3H2AQ7L7L0 130 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 TSPAN33Q86UF1 283 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 PAQR7Q86WK9 346 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 LRRC56Q8IYG6 542 aaPredicted RBP9.38□□□□□ -0.91
APTX-216ENST00000472896 SAMD14Q8IZD0 417 aaPredicted RBP9.38□□□□□ -0.91
APTX-216ENST00000472896 CPXM2Q8N436 756 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 ZNF527Q8NB42 609 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 FAM98AQ8NCA5 519 aaKnown RBP9.38□□□□□ -0.91
APTX-216ENST00000472896 SNIP1Q8TAD8 396 aaKnown RBP9.38□□□□□ -0.91
APTX-216ENST00000472896 ASB13Q8WXK3 278 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 HIST1H2ACQ93077 130 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 RGMAQ96B86 450 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 C11orf24Q96F05 449 aaPredicted RBP9.38□□□□□ -0.91
APTX-216ENST00000472896 OR2A7Q96R45 310 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 FAIM2Q9BWQ8 316 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 SAP130Q9H0E3 1048 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 C20orf85Q9H1P6 137 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 PCED1AQ9H1Q7 454 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 LRRN3Q9H3W5 708 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 GPN1Q9HCN4 374 aaPredicted RBP9.38□□□□□ -0.91
APTX-216ENST00000472896 FBXL3Q9UKT7 428 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 PCDHGA1Q9Y5H4 931 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 MGAQ8IWI9 3026 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 CKAP5Q14008 2032 aa9.38□□□□□ -0.91
APTX-216ENST00000472896 A0A1B0GTQ1 180 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 SHISA3A0PJX4 238 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 OR2M5A3KFT3 312 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 SNRPGP15A8MWD9 76 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 KDM4EB2RXH2 506 aaPredicted RBP9.37□□□□□ -0.91
APTX-216ENST00000472896 PRR23D1E9PI22 279 aaPredicted RBP9.37□□□□□ -0.91
APTX-216ENST00000472896 TEX46H3BTG2 121 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 SUSD5O60279 629 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 RAD1O60671 282 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 FZD7O75084 574 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 TOXO94900 526 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 SOX14O95416 240 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 IL5P05113 134 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 PRR23D2P0DMB1 279 aaPredicted RBP9.37□□□□□ -0.91
APTX-216ENST00000472896 CR2P20023 1033 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 GSTM3P21266 225 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 SLC1A3P43003 542 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 SEC61A1P61619 476 aaKnown RBP9.37□□□□□ -0.91
APTX-216ENST00000472896 CXADRP78310 365 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 DEFA5Q01523 94 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 ACSM2AQ08AH3 577 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 SNTB2Q13425 540 aaKnown RBP9.37□□□□□ -0.91
APTX-216ENST00000472896 SWI5Q1ZZU3 235 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 ACSM2BQ68CK6 577 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 FCRLBQ6BAA4 426 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 MRGPREQ86SM8 312 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 SPACA3Q8IXA5 215 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 POGLUT1Q8NBL1 392 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 FBXO15Q8NCQ5 510 aaPredicted RBP9.37□□□□□ -0.91
APTX-216ENST00000472896 PXT1Q8NFP0 134 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 WDR20Q8TBZ3 569 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 RFKQ969G6 155 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 CMTM3Q96MX0 182 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms