RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 KLHDC3Q9BQ90 382 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 RSPO3Q9BXY4 272 aaPredicted RBP18.05■□□□□ 0.48
SF1-213ENST00000472725 ADPRHL2Q9NX46 363 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 TESQ9UGI8 421 aaKnown RBP18.05■□□□□ 0.48
SF1-213ENST00000472725 ZNF337Q9Y3M9 751 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 NBASA2RRP1 2371 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 FMO6PO60774 539 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 ADAM11O75078 769 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 EPPINO95925 133 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 FESP07332 822 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 UQCRFS1P47985 274 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 CRYBA2P53672 197 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 CLDN18P56856 261 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 RGS8P57771 180 aaPredicted RBP18.04■□□□□ 0.48
SF1-213ENST00000472725 SELENOWP63302 87 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 CBX1P83916 185 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 BNIP2Q12982 314 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 NRF1Q16656 503 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 EIF2S3LQ2VIR3 472 aaKnown RBP18.04■□□□□ 0.48
SF1-213ENST00000472725 C4orf17Q53FE4 359 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 MTFR2Q6P444 385 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 PLEKHM3Q6ZWE6 761 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 RANBP3LQ86VV4 465 aaPredicted RBP18.04■□□□□ 0.48
SF1-213ENST00000472725 MEIOBQ8N635 442 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 SMYD1Q8NB12 490 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 OR52E4Q8NGH9 312 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 PRR7Q8TB68 274 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 SLC25A43Q8WUT9 341 aaPredicted RBP18.04■□□□□ 0.48
SF1-213ENST00000472725 FIG4Q92562 907 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 PROX1Q92786 737 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 ARHGDIGQ99819 225 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 ZNF559Q9BR84 538 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 TRIM2Q9C040 744 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 ADAM19Q9H013 955 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 MUC13Q9H3R2 512 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 GORASP2Q9H8Y8 452 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 PAQR5Q9NXK6 330 aaPredicted RBP18.04■□□□□ 0.48
SF1-213ENST00000472725 MAGEL2Q9UJ55 1249 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 SLC9A8Q9Y2E8 581 aa18.04■□□□□ 0.48
SF1-213ENST00000472725 SPIN1Q9Y657 262 aaPredicted RBP18.04■□□□□ 0.48
SF1-213ENST00000472725 SPENQ96T58 3664 aaKnown RBP18.03■□□□□ 0.48
SF1-213ENST00000472725 TRGV8A0A0C4DH27 118 aa18.03■□□□□ 0.48
SF1-213ENST00000472725 E9PLN8 166 aa18.03■□□□□ 0.48
SF1-213ENST00000472725 H3BML4 177 aa18.03■□□□□ 0.48
SF1-213ENST00000472725 AP3D1O14617 1153 aa18.03■□□□□ 0.48
SF1-213ENST00000472725 OPN1SWP03999 348 aa18.03■□□□□ 0.48
SF1-213ENST00000472725 GKN3PP0CG01 181 aa18.03■□□□□ 0.48
SF1-213ENST00000472725 CLK1P49759 484 aaKnown RBP18.03■□□□□ 0.48
SF1-213ENST00000472725 POLR2HP52434 150 aaKnown RBP18.03■□□□□ 0.48
SF1-213ENST00000472725 ZNF136P52737 540 aa18.03■□□□□ 0.48
SF1-213ENST00000472725 NCALDP61601 193 aa18.03■□□□□ 0.48
SF1-213ENST00000472725 C3AR1Q16581 482 aa18.03■□□□□ 0.48
SF1-213ENST00000472725 GLIPR1L2Q4G1C9 344 aa18.03■□□□□ 0.48
SF1-213ENST00000472725 LRRC23Q53EV4 343 aaPredicted RBP18.03■□□□□ 0.48
SF1-213ENST00000472725 CYBRD1Q53TN4 286 aa18.03■□□□□ 0.48
SF1-213ENST00000472725 EMC4Q5J8M3 183 aa18.03■□□□□ 0.48
SF1-213ENST00000472725 GLYATQ6IB77 296 aa18.03■□□□□ 0.48
SF1-213ENST00000472725 C3orf33Q6P1S2 294 aa18.03■□□□□ 0.48
SF1-213ENST00000472725 ESPNLQ6ZVH7 1005 aa18.03■□□□□ 0.48
SF1-213ENST00000472725 GPR32P1Q8NGA4 272 aa18.03■□□□□ 0.48
SF1-213ENST00000472725 VKORC1Q9BQB6 163 aa18.03■□□□□ 0.48
SF1-213ENST00000472725 C12orf10Q9HB07 376 aa18.03■□□□□ 0.48
SF1-213ENST00000472725 PNPLA3Q9NST1 481 aa18.03■□□□□ 0.48
SF1-213ENST00000472725 RPS6KA6Q9UK32 745 aa18.03■□□□□ 0.48
SF1-213ENST00000472725 GYG2O15488 501 aa18.02■□□□□ 0.48
SF1-213ENST00000472725 TCEA1P23193 301 aaKnown RBP18.02■□□□□ 0.48
SF1-213ENST00000472725 ACVR2AP27037 513 aa18.02■□□□□ 0.48
SF1-213ENST00000472725 RPS3AP61247 264 aaKnown RBP18.02■□□□□ 0.48
SF1-213ENST00000472725 MERTKQ12866 999 aa18.02■□□□□ 0.48
SF1-213ENST00000472725 DCST1Q5T197 706 aa18.02■□□□□ 0.48
SF1-213ENST00000472725 PDSS1Q5T2R2 415 aa18.02■□□□□ 0.48
SF1-213ENST00000472725 TMEM211Q6ICI0 200 aa18.02■□□□□ 0.48
SF1-213ENST00000472725 CBLL1Q75N03 491 aa18.02■□□□□ 0.48
SF1-213ENST00000472725 ULK2Q8IYT8 1036 aa18.02■□□□□ 0.48
SF1-213ENST00000472725 OR5M1Q8NGP8 315 aa18.02■□□□□ 0.48
SF1-213ENST00000472725 PHF10Q8WUB8 498 aaKnown RBP18.02■□□□□ 0.48
SF1-213ENST00000472725 POP5Q969H6 163 aaKnown RBP18.02■□□□□ 0.48
SF1-213ENST00000472725 UCN2Q96RP3 112 aa18.02■□□□□ 0.48
SF1-213ENST00000472725 BTBD10Q9BSF8 475 aa18.02■□□□□ 0.48
SF1-213ENST00000472725 POLR2J2Q9GZM3 115 aaKnown RBP18.02■□□□□ 0.48
SF1-213ENST00000472725 POLR2J3Q9H1A7 115 aaKnown RBP18.02■□□□□ 0.48
SF1-213ENST00000472725 CAMK2AQ9UQM7 478 aa18.02■□□□□ 0.48
SF1-213ENST00000472725 H0Y3Z8 333 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 ADAMDEC1O15204 470 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 PRG2P13727 222 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 STARP49675 285 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 PER3P56645 1201 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 CEACAM7Q14002 265 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 ZNF585AQ6P3V2 769 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 CHMP1BQ7LBR1 199 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 COMTD1Q86VU5 262 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 LILRA2Q8N149 483 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 RNF148Q8N7C7 305 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 OR5M9Q8NGP3 310 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 DNAJA4Q8WW22 397 aaPredicted RBP18.01■□□□□ 0.47
SF1-213ENST00000472725 FAM162AQ96A26 154 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 ZNF524Q96C55 264 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 SLC7A6OSQ96CW6 309 aaPredicted RBP18.01■□□□□ 0.47
SF1-213ENST00000472725 NPAS1Q99742 590 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 PCDHAC1Q9H158 963 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms