RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 ERVK-10P10266 1014 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 CPA3P15088 417 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 CD1BP29016 333 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 SLC1A3P43003 542 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 CDKN1BP46527 198 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 CEBPDP49716 269 aaPredicted RBP6.12□□□□□ -1.43
SCAF4-205ENST00000472318 ENTPD1P49961 510 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 RPL23AP62750 156 aaKnown RBP6.12□□□□□ -1.43
SCAF4-205ENST00000472318 RAE1P78406 368 aaKnown RBP6.12□□□□□ -1.43
SCAF4-205ENST00000472318 DCDP81605 110 aaKnown RBP6.12□□□□□ -1.43
SCAF4-205ENST00000472318 HOXA4Q00056 320 aaPredicted RBP6.12□□□□□ -1.43
SCAF4-205ENST00000472318 PNLIPRP3Q17RR3 467 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 ZCWPW2Q504Y3 356 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 PDLIM3Q53GG5 364 aaPredicted RBP6.12□□□□□ -1.43
SCAF4-205ENST00000472318 SGO1Q5FBB7 561 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 LRRC66Q68CR7 880 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 LRRC8EQ6NSJ5 796 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 SHC4Q6S5L8 630 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 QSOX2Q6ZRP7 698 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 SHISA6Q6ZSJ9 500 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 Q6ZWC4 215 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 NRARPQ7Z6K4 114 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 GRAMD2AQ8IUY3 354 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 LMO3Q8TAP4 145 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 AKAP1Q92667 903 aaKnown RBP eCLIP6.12□□□□□ -1.43
SCAF4-205ENST00000472318 CTHRC1Q96CG8 243 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 CXorf40BQ96DE9 158 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 ZC3HAV1LQ96H79 300 aaKnown RBP6.12□□□□□ -1.43
SCAF4-205ENST00000472318 EGLN2Q96KS0 407 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 ZNF583Q96ND8 569 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 GPR78Q96P69 363 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 MCCC1Q96RQ3 725 aaPredicted RBP6.12□□□□□ -1.43
SCAF4-205ENST00000472318 DDOQ99489 341 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 COQ7Q99807 217 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 QTRT1Q9BXR0 403 aaKnown RBP6.12□□□□□ -1.43
SCAF4-205ENST00000472318 MRPL37Q9BZE1 423 aaKnown RBP6.12□□□□□ -1.43
SCAF4-205ENST00000472318 SPRTNQ9H040 489 aaPredicted RBP6.12□□□□□ -1.43
SCAF4-205ENST00000472318 OR2AG1Q9H205 316 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 UPF2Q9HAU5 1272 aaKnown RBP6.12□□□□□ -1.43
SCAF4-205ENST00000472318 ZNF160Q9HCG1 818 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 Q9N2J8 555 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 KLHL28Q9NXS3 571 aa6.12□□□□□ -1.43
SCAF4-205ENST00000472318 DHCR7Q9UBM7 475 aaKnown RBP6.12□□□□□ -1.43
SCAF4-205ENST00000472318 SPTBP11277 2137 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 HCFC1P51610 2035 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 A0A0G2JK05 382 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 ARHGEF9O43307 516 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 HCRTR1O43613 425 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 LGI1O95970 557 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 CSTAP01040 98 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 HBQ1P09105 142 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 MYZAPP0CAP1 466 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 HPGDP15428 266 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 ST6GAL1P15907 406 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 CPN2P22792 545 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 CHI3L1P36222 383 aaPredicted RBP6.11□□□□□ -1.43
SCAF4-205ENST00000472318 FMO5P49326 533 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 TPTEP56180 551 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 SSTP61278 116 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 SUMO2P61956 95 aaKnown RBP6.11□□□□□ -1.43
SCAF4-205ENST00000472318 TRAF2Q12933 501 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 NAE1Q13564 534 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 COTL1Q14019 142 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 NKAIN1Q4KMZ8 207 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 RHBDD2Q6NTF9 364 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 C1orf87Q8N0U7 546 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 MINDY2Q8NBR6 621 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 R3HDM4Q96D70 268 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 SPDL1Q96EA4 605 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 SCRN2Q96FV2 425 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 BTBD9Q96Q07 612 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 C11orf70Q9BRQ4 267 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 THAP7Q9BT49 309 aaPredicted RBP6.11□□□□□ -1.43
SCAF4-205ENST00000472318 ABHD14AQ9BUJ0 271 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 ALG12Q9BV10 488 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 HES7Q9BYE0 225 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 WDR76Q9H967 626 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 IL20Q9NYY1 176 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 SPATA7Q9P0W8 599 aa6.11□□□□□ -1.43
SCAF4-205ENST00000472318 DOCK10Q96BY6 2186 aa6.1□□□□□ -1.43
SCAF4-205ENST00000472318 TENM1Q9UKZ4 2725 aa6.1□□□□□ -1.43
SCAF4-205ENST00000472318 CHD3Q12873 2000 aaKnown RBP6.1□□□□□ -1.43
SCAF4-205ENST00000472318 A0A1W2PPR1 153 aa6.1□□□□□ -1.43
SCAF4-205ENST00000472318 TCRBV7S3A2A0A539 114 aa6.1□□□□□ -1.43
SCAF4-205ENST00000472318 ASPDHA6ND91 283 aa6.1□□□□□ -1.43
SCAF4-205ENST00000472318 OR5H15A6NDH6 313 aa6.1□□□□□ -1.43
SCAF4-205ENST00000472318 FAM90A10PA6NDY2 464 aa6.1□□□□□ -1.43
SCAF4-205ENST00000472318 TMCO5BA8MYB1 307 aa6.1□□□□□ -1.43
SCAF4-205ENST00000472318 IDSB3KWA1 339 aa6.1□□□□□ -1.43
SCAF4-205ENST00000472318 ZNF208O43345 1280 aa6.1□□□□□ -1.43
SCAF4-205ENST00000472318 SERPINI2O75830 405 aa6.1□□□□□ -1.43
SCAF4-205ENST00000472318 CD63P08962 238 aa6.1□□□□□ -1.43
SCAF4-205ENST00000472318 ZNF7P17097 686 aaPredicted RBP6.1□□□□□ -1.43
SCAF4-205ENST00000472318 POLR2CP19387 275 aaPredicted RBP6.1□□□□□ -1.43
SCAF4-205ENST00000472318 PAICSP22234 425 aaKnown RBP6.1□□□□□ -1.43
SCAF4-205ENST00000472318 IDSP22304 550 aa6.1□□□□□ -1.43
SCAF4-205ENST00000472318 HTR2AP28223 471 aa6.1□□□□□ -1.43
SCAF4-205ENST00000472318 GABRA5P31644 462 aa6.1□□□□□ -1.43
SCAF4-205ENST00000472318 NSFP46459 744 aaKnown RBP6.1□□□□□ -1.43
SCAF4-205ENST00000472318 STC1P52823 247 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms