RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 RNF122Q9H9V4 155 aa13.52□□□□□ -0.25
CALD1-215ENST00000472096 SLC52A3Q9NQ40 469 aa13.52□□□□□ -0.25
CALD1-215ENST00000472096 PAQR5Q9NXK6 330 aaPredicted RBP13.52□□□□□ -0.25
CALD1-215ENST00000472096 FOXD3Q9UJU5 478 aaPredicted RBP13.52□□□□□ -0.25
CALD1-215ENST00000472096 PCDHB14Q9Y5E9 798 aa13.52□□□□□ -0.25
CALD1-215ENST00000472096 TEX15Q9BXT5 2789 aa13.52□□□□□ -0.25
CALD1-215ENST00000472096 DSPPQ9NZW4 1301 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 A0A0G2JND7 137 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 A0A0J9YW62 118 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 AGAP5A6NIR3 686 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 CLDN24A6NM45 220 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 CXCL13O43927 109 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 AQP8O94778 261 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 BCHEP06276 602 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 SFTPDP35247 375 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 PEX19P40855 299 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 EEF1A1P68104 462 aaKnown RBP13.51□□□□□ -0.25
CALD1-215ENST00000472096 KCNJ10P78508 379 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 SNTB1Q13884 538 aaKnown RBP13.51□□□□□ -0.25
CALD1-215ENST00000472096 AGKQ53H12 422 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 LRIF1Q5T3J3 769 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 EEF1A1P5Q5VTE0 462 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 VWA1Q6PCB0 445 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 MSRB3Q8IXL7 192 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 WDR60Q8WVS4 1066 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 ST8SIA1Q92185 356 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 EXOSC3Q9NQT5 275 aaKnown RBP13.51□□□□□ -0.25
CALD1-215ENST00000472096 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.51□□□□□ -0.25
CALD1-215ENST00000472096 SLC25A37Q9NYZ2 338 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 KCNN3Q9UGI6 736 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 PACSIN3Q9UKS6 424 aa13.51□□□□□ -0.25
CALD1-215ENST00000472096 CLIC1O00299 241 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 ST8SIA5O15466 376 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 BMP2P12643 396 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 CD1EP15812 388 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 NCF2P19878 526 aaPredicted RBP13.5□□□□□ -0.25
CALD1-215ENST00000472096 PGCP20142 388 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 SLC6A8P48029 635 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 SMCPP49901 116 aaPredicted RBP13.5□□□□□ -0.25
CALD1-215ENST00000472096 CRISP3P54108 245 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 SESN3P58005 492 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 TLE4Q04727 773 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 FADDQ13158 208 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 MYBPHQ13203 477 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 GUSBP1Q15486 140 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 RGNQ15493 299 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 SWI5Q1ZZU3 235 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 HSP90B2PQ58FF3 399 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 PAGE3Q5JUK9 113 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 PDSS1Q5T2R2 415 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 HBMQ6B0K9 141 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 PPP4R4Q6NUP7 873 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 C3orf33Q6P1S2 294 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 LUZP2Q86TE4 346 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 CMIPQ8IY22 773 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 CNEP1R1Q8N9A8 125 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 SLC38A5Q8WUX1 472 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 TMEM234Q8WY98 164 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 PMM1Q92871 262 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 RAD21L1Q9H4I0 556 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 RABEP2Q9H5N1 569 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 COQ10BQ9H8M1 238 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 MTHFD2LQ9H903 347 aaPredicted RBP13.5□□□□□ -0.25
CALD1-215ENST00000472096 MED4Q9NPJ6 270 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 FGFR1OP2Q9NVK5 253 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 THUMPD1Q9NXG2 353 aaKnown RBP13.5□□□□□ -0.25
CALD1-215ENST00000472096 DNAJB12Q9NXW2 375 aaKnown RBP13.5□□□□□ -0.25
CALD1-215ENST00000472096 CALML5Q9NZT1 146 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 SLAMF8Q9P0V8 285 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 MCTS1Q9ULC4 181 aaKnown RBP13.5□□□□□ -0.25
CALD1-215ENST00000472096 TRIM33Q9UPN9 1127 aa13.5□□□□□ -0.25
CALD1-215ENST00000472096 TRBV5-3A0A0A0MS03 114 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 GJE1A6NN92 205 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 ADAM11O75078 769 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 SYNGR4O95473 234 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 DBIP07108 87 aaKnown RBP13.49□□□□□ -0.25
CALD1-215ENST00000472096 TFPTP0C1Z6 253 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 NID1P14543 1247 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 KIR2DL2P43627 348 aaPredicted RBP13.49□□□□□ -0.25
CALD1-215ENST00000472096 CPA2P48052 419 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 SIRPAP78324 504 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 SORDQ00796 357 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 ZNF239Q16600 458 aaKnown RBP13.49□□□□□ -0.25
CALD1-215ENST00000472096 RPS26P11Q5JNZ5 115 aaPredicted RBP13.49□□□□□ -0.25
CALD1-215ENST00000472096 MRPL2Q5T653 305 aaKnown RBP13.49□□□□□ -0.25
CALD1-215ENST00000472096 PEX5LQ8IYB4 626 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 CNOT9Q92600 299 aaKnown RBP13.49□□□□□ -0.25
CALD1-215ENST00000472096 STARD4Q96DR4 205 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 TMEM19Q96HH6 336 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 LURAP1Q96LR2 239 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 ZNF559Q9BR84 538 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 RBM24Q9BX46 236 aaKnown RBP13.49□□□□□ -0.25
CALD1-215ENST00000472096 TMEM120AQ9BXJ8 343 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 SRXN1Q9BYN0 137 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 PRRG4Q9BZD6 226 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 MCCC2Q9HCC0 563 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 ACER3Q9NUN7 267 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 GALNT8Q9NY28 637 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 VAPAQ9P0L0 249 aa13.49□□□□□ -0.25
CALD1-215ENST00000472096 FREM1Q5H8C1 2179 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms