RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 PEX19P40855 299 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 APOBEC1P41238 236 aaKnown RBP8.2□□□□□ -1.1
SYN3-211ENST00000472027 KIR2DL3P43628 341 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 IDH2P48735 452 aaKnown RBP8.2□□□□□ -1.1
SYN3-211ENST00000472027 ARFIP2P53365 341 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 SIRPAP78324 504 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 MERTKQ12866 999 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 FADDQ13158 208 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 MYBPHQ13203 477 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 SELENBP1Q13228 472 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 RPS26P11Q5JNZ5 115 aaPredicted RBP8.2□□□□□ -1.1
SYN3-211ENST00000472027 MRPL2Q5T653 305 aaKnown RBP8.2□□□□□ -1.1
SYN3-211ENST00000472027 GTF2IRD2BQ6EKJ0 949 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 CGB2Q6NT52 195 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 DLEU7Q6UYE1 221 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 PLEKHM3Q6ZWE6 761 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 FAM214BQ7L5A3 538 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 GTF2IRD2Q86UP8 949 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 VRK2Q86Y07 508 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 KIF18BQ86Y91 864 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 CMIPQ8IY22 773 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 OR52P1PQ8NH57 321 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 ROBO4Q8WZ75 1007 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 MAL2Q969L2 176 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 ZNF559Q9BR84 538 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 CCDC134Q9H6E4 229 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 MCCC2Q9HCC0 563 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 A4GALTQ9NPC4 353 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 TIGARQ9NQ88 270 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 SERINC1Q9NRX5 453 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 RLIMQ9NVW2 624 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 DNAJB12Q9NXW2 375 aaKnown RBP8.2□□□□□ -1.1
SYN3-211ENST00000472027 LEF1Q9UJU2 399 aaPredicted RBP8.2□□□□□ -1.1
SYN3-211ENST00000472027 PACSIN3Q9UKS6 424 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 MCTS1Q9ULC4 181 aaKnown RBP8.2□□□□□ -1.1
SYN3-211ENST00000472027 CLEC4AQ9UMR7 237 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 NDUFAF1Q9Y375 327 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 GMEB1Q9Y692 573 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 DSPPQ9NZW4 1301 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 HCFC1P51610 2035 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 MED12Q93074 2177 aa8.2□□□□□ -1.1
SYN3-211ENST00000472027 LRRK2Q5S007 2527 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 TRBV5-3A0A0A0MS03 114 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 EVPLLA8MZ36 301 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 AP3D1O14617 1153 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 MSTNO14793 375 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 PGM3O95394 542 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 PLGP00747 810 aaPredicted RBP8.19□□□□□ -1.1
SYN3-211ENST00000472027 CGAP01215 116 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 GKN3PP0CG01 181 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 CD8BP10966 210 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 GPX2P18283 190 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 PPIBP23284 216 aaKnown RBP8.19□□□□□ -1.1
SYN3-211ENST00000472027 SLC7A1P30825 629 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 MDH1P40925 334 aaKnown RBP8.19□□□□□ -1.1
SYN3-211ENST00000472027 CPA2P48052 419 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 KRTAP10-9P60411 292 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 RAC3P60763 192 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 GUSBP1Q15486 140 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 ZNF239Q16600 458 aaKnown RBP8.19□□□□□ -1.1
SYN3-211ENST00000472027 LIN52Q52LA3 116 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 RUNDC3AQ59EK9 446 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 C3orf33Q6P1S2 294 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 ZNF836Q6ZNA1 936 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 GRINAQ7Z429 371 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 RETREG3Q86VR2 466 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 ADGRG3Q86Y34 549 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 ZZZ3Q8IYH5 903 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 C10orf111Q8N326 155 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 ZNF610Q8N9Z0 462 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 LINC01560Q8TB33 94 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 TSPEARQ8WU66 669 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 CPNE4Q96A23 557 aaPredicted RBP8.19□□□□□ -1.1
SYN3-211ENST00000472027 REXO5Q96IC2 774 aaKnown RBP8.19□□□□□ -1.1
SYN3-211ENST00000472027 GMPPAQ96IJ6 420 aaPredicted RBP8.19□□□□□ -1.1
SYN3-211ENST00000472027 LURAP1Q96LR2 239 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 OR5B2Q96R09 309 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 CCDC106Q9BWC9 280 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 SRXN1Q9BYN0 137 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 OPN3Q9H1Y3 402 aaPredicted RBP8.19□□□□□ -1.1
SYN3-211ENST00000472027 COQ10BQ9H8M1 238 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 BCL2L10Q9HD36 194 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 CTPS2Q9NRF8 586 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 PLSCR4Q9NRQ2 329 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 GLRX2Q9NS18 164 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 GALNT8Q9NY28 637 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 CRIM1Q9NZV1 1036 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.19□□□□□ -1.1
SYN3-211ENST00000472027 ZNF232Q9UNY5 417 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 ZNF443Q9Y2A4 671 aaPredicted RBP8.19□□□□□ -1.1
SYN3-211ENST00000472027 IFT52Q9Y366 437 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 FLNBO75369 2602 aaKnown RBP8.19□□□□□ -1.1
SYN3-211ENST00000472027 UTP20O75691 2785 aaKnown RBP8.19□□□□□ -1.1
SYN3-211ENST00000472027 PTPN13Q12923 2485 aa8.19□□□□□ -1.1
SYN3-211ENST00000472027 CDHR4A6H8M9 788 aa8.18□□□□□ -1.1
SYN3-211ENST00000472027 CFAP73A6NFT4 308 aa8.18□□□□□ -1.1
SYN3-211ENST00000472027 TUBAL3A6NHL2 446 aa8.18□□□□□ -1.1
SYN3-211ENST00000472027 C5orf58C9J3I9 102 aa8.18□□□□□ -1.1
SYN3-211ENST00000472027 ANGPT2O15123 496 aa8.18□□□□□ -1.1
SYN3-211ENST00000472027 SS18L1O75177 396 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms