RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 HEPHL1Q6MZM0 1159 aa20.04■□□□□ 0.8
C9orf3-213ENST00000471978 C3orf33Q6P1S2 294 aa20.04■□□□□ 0.8
C9orf3-213ENST00000471978 EIF3MQ7L2H7 374 aaKnown RBP20.04■□□□□ 0.8
C9orf3-213ENST00000471978 VPS37AQ8NEZ2 397 aa20.04■□□□□ 0.8
C9orf3-213ENST00000471978 XAGE5Q8WWM1 108 aa20.04■□□□□ 0.8
C9orf3-213ENST00000471978 ST8SIA1Q92185 356 aa20.04■□□□□ 0.8
C9orf3-213ENST00000471978 TACO1Q9BSH4 297 aaKnown RBP20.04■□□□□ 0.8
C9orf3-213ENST00000471978 TMEM204Q9BSN7 226 aa20.04■□□□□ 0.8
C9orf3-213ENST00000471978 NUF2Q9BZD4 464 aa20.04■□□□□ 0.8
C9orf3-213ENST00000471978 QRSL1Q9H0R6 528 aaKnown RBP20.04■□□□□ 0.8
C9orf3-213ENST00000471978 KLHL9Q9P2J3 617 aa20.04■□□□□ 0.8
C9orf3-213ENST00000471978 H7C1Q1 480 aa20.03■□□□□ 0.8
C9orf3-213ENST00000471978 DNAJA2O60884 412 aa20.03■□□□□ 0.8
C9orf3-213ENST00000471978 ADAP00813 363 aa20.03■□□□□ 0.8
C9orf3-213ENST00000471978 IL32P24001 234 aa20.03■□□□□ 0.8
C9orf3-213ENST00000471978 SESN3P58005 492 aa20.03■□□□□ 0.8
C9orf3-213ENST00000471978 TNFAIP8L2Q6P589 184 aaPredicted RBP20.03■□□□□ 0.8
C9orf3-213ENST00000471978 KIRREL3Q8IZU9 778 aa20.03■□□□□ 0.8
C9orf3-213ENST00000471978 CIARTQ8N365 385 aaPredicted RBP20.03■□□□□ 0.8
C9orf3-213ENST00000471978 TMEM171Q8WVE6 324 aa20.03■□□□□ 0.8
C9orf3-213ENST00000471978 RAB8BQ92930 207 aa20.03■□□□□ 0.8
C9orf3-213ENST00000471978 TESCQ96BS2 214 aa20.03■□□□□ 0.8
C9orf3-213ENST00000471978 COX4I2Q96KJ9 171 aa20.03■□□□□ 0.8
C9orf3-213ENST00000471978 OR5B2Q96R09 309 aa20.03■□□□□ 0.8
C9orf3-213ENST00000471978 GSX2Q9BZM3 304 aa20.03■□□□□ 0.8
C9orf3-213ENST00000471978 BCO1Q9HAY6 547 aa20.03■□□□□ 0.8
C9orf3-213ENST00000471978 KCNK9Q9NPC2 374 aa20.03■□□□□ 0.8
C9orf3-213ENST00000471978 SERINC1Q9NRX5 453 aa20.03■□□□□ 0.8
C9orf3-213ENST00000471978 FAM171A2A8MVW0 826 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 HS3ST1O14792 307 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 ANKRD28O15084 1053 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 KIAA0513O60268 411 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 H6PDO95479 791 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 LBPP18428 481 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 PGCP20142 388 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 PTH2RP49190 550 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 CLNS1AP54105 237 aaKnown RBP20.02■□□□□ 0.8
C9orf3-213ENST00000471978 MERTKQ12866 999 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 STX3Q13277 289 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 MPP2Q14168 576 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 MAPK14Q16539 360 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 SPANXN4Q5MJ08 99 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 CEP85LQ5SZL2 805 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 TYW3Q6IPR3 259 aaKnown RBP20.02■□□□□ 0.8
C9orf3-213ENST00000471978 IGFBPL1Q8WX77 278 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 TMEM234Q8WY98 164 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 KISS1RQ969F8 398 aaPredicted RBP20.02■□□□□ 0.8
C9orf3-213ENST00000471978 ZBTB9Q96C00 473 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 PSD2Q9BQI7 771 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 BDH2Q9BUT1 245 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 HAO1Q9UJM8 370 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 ING1Q9UK53 422 aaPredicted RBP20.02■□□□□ 0.8
C9orf3-213ENST00000471978 WDR45Q9Y484 360 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 PRR14LQ5THK1 2151 aa20.02■□□□□ 0.8
C9orf3-213ENST00000471978 ZNF814B7Z6K7 855 aa20.01■□□□□ 0.79
C9orf3-213ENST00000471978 SMAD9O15198 467 aaKnown RBP20.01■□□□□ 0.79
C9orf3-213ENST00000471978 HEXAP06865 529 aa20.01■□□□□ 0.79
C9orf3-213ENST00000471978 GUSBP08236 651 aa20.01■□□□□ 0.79
C9orf3-213ENST00000471978 RASGEF1BQ0VAM2 473 aa20.01■□□□□ 0.79
C9orf3-213ENST00000471978 CASP8Q14790 479 aa20.01■□□□□ 0.79
C9orf3-213ENST00000471978 P2RY6Q15077 328 aa20.01■□□□□ 0.79
C9orf3-213ENST00000471978 TAB1Q15750 504 aa20.01■□□□□ 0.79
C9orf3-213ENST00000471978 DPY19L1Q2PZI1 675 aa20.01■□□□□ 0.79
C9orf3-213ENST00000471978 SAXO2Q658L1 398 aa20.01■□□□□ 0.79
C9orf3-213ENST00000471978 LRRC34Q8IZ02 419 aa20.01■□□□□ 0.79
C9orf3-213ENST00000471978 ZNF611Q8N823 705 aa20.01■□□□□ 0.79
C9orf3-213ENST00000471978 HSD17B8Q92506 261 aa20.01■□□□□ 0.79
C9orf3-213ENST00000471978 AKAP1Q92667 903 aaKnown RBP eCLIP20.01■□□□□ 0.79
C9orf3-213ENST00000471978 ROPN1LQ96C74 230 aa20.01■□□□□ 0.79
C9orf3-213ENST00000471978 NEURL3Q96EH8 262 aa20.01■□□□□ 0.79
C9orf3-213ENST00000471978 PAIP2Q9BPZ3 127 aaKnown RBP20.01■□□□□ 0.79
C9orf3-213ENST00000471978 CXorf56Q9H5V9 222 aa20.01■□□□□ 0.79
C9orf3-213ENST00000471978 POLE3Q9NRF9 147 aa20.01■□□□□ 0.79
C9orf3-213ENST00000471978 ACER3Q9NUN7 267 aa20.01■□□□□ 0.79
C9orf3-213ENST00000471978 PNPOQ9NVS9 261 aa20.01■□□□□ 0.79
C9orf3-213ENST00000471978 SLC35A3Q9Y2D2 325 aa20.01■□□□□ 0.79
C9orf3-213ENST00000471978 TRIM64A6NGJ6 449 aa20■□□□□ 0.79
C9orf3-213ENST00000471978 TRIM64BA6NI03 449 aa20■□□□□ 0.79
C9orf3-213ENST00000471978 C9JVG2 144 aa20■□□□□ 0.79
C9orf3-213ENST00000471978 SMAD7O15105 426 aaKnown RBP20■□□□□ 0.79
C9orf3-213ENST00000471978 CYTIPO60759 359 aa20■□□□□ 0.79
C9orf3-213ENST00000471978 CHI3L1P36222 383 aaPredicted RBP20■□□□□ 0.79
C9orf3-213ENST00000471978 PGM1P36871 562 aa20■□□□□ 0.79
C9orf3-213ENST00000471978 OR3A2P47893 321 aa20■□□□□ 0.79
C9orf3-213ENST00000471978 KHKP50053 298 aa20■□□□□ 0.79
C9orf3-213ENST00000471978 FUT5Q11128 374 aa20■□□□□ 0.79
C9orf3-213ENST00000471978 ITGADQ13349 1161 aa20■□□□□ 0.79
C9orf3-213ENST00000471978 CAPRIN1Q14444 709 aaKnown RBP20■□□□□ 0.79
C9orf3-213ENST00000471978 FAM174BQ3ZCQ3 159 aa20■□□□□ 0.79
C9orf3-213ENST00000471978 TNFAIP8L3Q5GJ75 292 aa20■□□□□ 0.79
C9orf3-213ENST00000471978 ZNF619Q8N2I2 560 aa20■□□□□ 0.79
C9orf3-213ENST00000471978 FAM71CQ8NEG0 241 aa20■□□□□ 0.79
C9orf3-213ENST00000471978 RAB3IL1Q8TBN0 382 aa20■□□□□ 0.79
C9orf3-213ENST00000471978 OIT3Q8WWZ8 545 aa20■□□□□ 0.79
C9orf3-213ENST00000471978 ZNF775Q96BV0 537 aaPredicted RBP20■□□□□ 0.79
C9orf3-213ENST00000471978 SLC35A5Q9BS91 424 aa20■□□□□ 0.79
C9orf3-213ENST00000471978 MEAF6Q9HAF1 191 aa20■□□□□ 0.79
C9orf3-213ENST00000471978 NGBQ9NPG2 151 aa20■□□□□ 0.79
C9orf3-213ENST00000471978 MARCOQ9UEW3 520 aaPredicted RBP20■□□□□ 0.79
C9orf3-213ENST00000471978 FREM1Q5H8C1 2179 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms