RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 INTS11Q5TA45 600 aaKnown RBP8.19□□□□□ -1.1
SF3A1-206ENST00000471037 PRSS57Q6UWY2 283 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 NUP54Q7Z3B4 507 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 IFNEQ86WN2 208 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 C10orf111Q8N326 155 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 WDSUB1Q8N9V3 476 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 SLC9A6Q92581 669 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 PIGTQ969N2 578 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 INTS12Q96CB8 462 aaKnown RBP8.19□□□□□ -1.1
SF3A1-206ENST00000471037 CCDC124Q96CT7 223 aaKnown RBP8.19□□□□□ -1.1
SF3A1-206ENST00000471037 C16orf58Q96GQ5 468 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 VSTM2LQ96N03 204 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 BTBD9Q96Q07 612 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 NODALQ96S42 347 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 TRIM15Q9C019 465 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 PIGUQ9H490 435 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 PIF1Q9H611 641 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 FOLH1BQ9HBA9 442 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 GALNT9Q9HCQ5 603 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 EXD2Q9NVH0 621 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 NDRG3Q9UGV2 375 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 MAGEL2Q9UJ55 1249 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 LIPT1Q9Y234 373 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 POMPQ9Y244 141 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 SNX13Q9Y5W8 968 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 PRAMEF25A6NGN4 478 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 ANKRD65E5RJM6 399 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 MSTNO14793 375 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 CASKO14936 926 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 GSTA4O15217 222 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 SIAH2O43255 324 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 HCRTR2O43614 444 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 UGT2B11O75310 529 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 GMNNO75496 209 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 TNFSF13O75888 250 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 CRHP06850 196 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 NUDT7P0C024 238 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 OR12D1P0DN82 309 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 ACP2P11117 423 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 GGT1P19440 569 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 PPICP45877 212 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 LHX2P50458 406 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 CASP9P55211 416 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 CDK6Q00534 326 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 PLCXD2Q0VAA5 305 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 SCARB2Q14108 478 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 ADRM1Q16186 407 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 DUSP5Q16690 384 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 C1orf146Q5VVC0 180 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 PRAMEF8Q5VWM4 474 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 PRAMEF7Q5VXH5 474 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 DESI1Q6ICB0 168 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 HEPHL1Q6MZM0 1159 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 C16orf62Q7Z3J2 963 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 PRIMA1Q86XR5 153 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 PTOV1Q86YD1 416 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 P3H2Q8IVL5 708 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 GCNT2Q8N0V5 402 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 COX18Q8N8Q8 333 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 SLC16A11Q8NCK7 471 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 FAM156AQ8NDB6 213 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 SIMC1Q8NDZ2 872 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 HIPK4Q8NE63 616 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 OR5D16Q8NGK9 328 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 OR14L1PQ8NHC6 308 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 XAGE5Q8WWM1 108 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 RAB8BQ92930 207 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 POP5Q969H6 163 aaKnown RBP8.18□□□□□ -1.1
SF3A1-206ENST00000471037 OMA1Q96E52 524 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 DTNBP1Q96EV8 351 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 LCORQ96JN0 433 aaPredicted RBP8.18□□□□□ -1.1
SF3A1-206ENST00000471037 BTBD2Q9BX70 525 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 ITPAQ9BY32 194 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 Q9N2J8 555 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 KLRF1Q9NZS2 232 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 CALML5Q9NZT1 146 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 ACTR3BQ9P1U1 418 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 ANGPT4Q9Y264 503 aa8.18□□□□□ -1.1
SF3A1-206ENST00000471037 GPR55Q9Y2T6 319 aaPredicted RBP8.18□□□□□ -1.1
SF3A1-206ENST00000471037 A0A1W2PNV4 684 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 FRG2CA6NGY1 282 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 DEFB108AA8MXU0 73 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 C5orf58C9J3I9 102 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 CXCR6O00574 342 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 ACOT8O14734 319 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 ARPC2O15144 300 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 TO15178 435 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 SMPD2O60906 423 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 BCHEP06276 602 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 GUSBP08236 651 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 TFPTP0C1Z6 253 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 CT45A8P0DMV1 189 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 CT45A9P0DMV2 189 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 NR2F1P10589 423 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 ZNF708P17019 499 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 FPR1P21462 350 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 DRD5P21918 477 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 SRD5A2P31213 254 aa8.17□□□□□ -1.1
SF3A1-206ENST00000471037 GABRA3P34903 492 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms