RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 MAPK1P28482 360 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 RNF144AP50876 292 aaPredicted RBP12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 DSCR9P59020 149 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 TP53BP2Q13625 1128 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 CBFBQ13951 182 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 MLC1Q15049 377 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 SPDYE7PQ495Y7 208 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 TIMM23BQ5SRD1 257 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 DCST2Q5T1A1 773 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 CDC73Q6P1J9 531 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 C3orf33Q6P1S2 294 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 CBLN3Q6UW01 205 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 DNM1P46Q6ZS02 220 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 P2RY8Q86VZ1 359 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 PIAS4Q8N2W9 510 aaPredicted RBP12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 OR56A1Q8NGH5 318 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 GPR119Q8TDV5 335 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 ACTRT3Q9BYD9 372 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 CXorf36Q9H7Y0 433 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 TNFRSF12AQ9NP84 129 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 PRSS50Q9UI38 385 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 CDC42EP3Q9UKI2 254 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 ICAM5Q9UMF0 924 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 MGAT4BQ9UQ53 548 aa12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 NUP214P35658 2090 aaPredicted RBP12.28□□□□□ -0.44
SEMA3F-208ENST00000470737 TMEM114B3SHH9 223 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 SHISA9B4DS77 424 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 OIP5O43482 229 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 CD8AP01732 235 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 THBS1P07996 1170 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 LINC00032P0C843 101 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 FAM157CP0CG43 387 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 CCT3P49368 545 aaKnown RBP12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 ATP12AP54707 1039 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 TOMM34Q15785 309 aaPredicted RBP12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 RFTN2Q52LD8 501 aaPredicted RBP12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 KLHL26Q53HC5 615 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 ARL13AQ5H913 290 aaPredicted RBP12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 EXOSC6Q5RKV6 272 aaKnown RBP12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 KLHL17Q6TDP4 642 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 TMEM108Q6UXF1 575 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 Q6ZSR9 355 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 GALNT5Q7Z7M9 940 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 DDIASQ8IXT1 998 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 KIRREL3Q8IZU9 778 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 FBXL14Q8N1E6 418 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 DEPDC4Q8N2C3 294 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 OR2T11Q8NH01 316 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 OR5B2Q96R09 309 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 CACNG6Q9BXT2 260 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 SERINC1Q9NRX5 453 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 B3GALT5Q9Y2C3 310 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 DTNAQ9Y4J8 743 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 PLCE1Q9P212 2302 aa12.27□□□□□ -0.45
SEMA3F-208ENST00000470737 CUBNO60494 3623 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 IGHV4-30-2A0A087WSY4 118 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 CIB4A0PJX0 185 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 FAM234BA2RU67 622 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 ZNF724A8MTY0 619 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 C9JVG2 144 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 SCAMP2O15127 329 aaKnown RBP12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 ZNF264O43296 627 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 EIF4E2O60573 245 aaKnown RBP12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 CYTIPO60759 359 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 UBL4AP11441 157 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 BCKDHAP12694 445 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 PTNP21246 168 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 CSNK2A1P68400 391 aaPredicted RBP12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 CASP8Q14790 479 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 QPRTQ15274 297 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 RAB35Q15286 201 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 NDUFAF6Q330K2 333 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 LSM12Q3MHD2 195 aaKnown RBP12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 UGT3A2Q3SY77 523 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 SLC25A53Q5H9E4 307 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 C6orf52Q5T4I8 152 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 KANK2Q63ZY3 851 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 SLC22A25Q6T423 547 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 SEZ6L2Q6UXD5 910 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 NUDCD3Q8IVD9 361 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 UBE2J2Q8N2K1 259 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 NATD1Q8N6N6 113 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 OR5W2Q8NH69 310 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 OR5P2Q8WZ92 322 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 ZNF775Q96BV0 537 aaPredicted RBP12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 MOAP1Q96BY2 351 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 TLCD1Q96CP7 247 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 KCNK17Q96T54 332 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 MECRQ9BV79 373 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 BEX2Q9BXY8 128 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 TMBIM4Q9HC24 238 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 SIRT3Q9NTG7 399 aaPredicted RBP12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 CBLN4Q9NTU7 201 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 ATAD3AQ9NVI7 634 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 EMC3Q9P0I2 261 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 ATP6V1HQ9UI12 483 aa12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 HEATR1Q9H583 2144 aaKnown RBP12.26□□□□□ -0.45
SEMA3F-208ENST00000470737 OR5H1A6NKK0 313 aa12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 CCT8L1PA6NM43 557 aa12.25□□□□□ -0.45
SEMA3F-208ENST00000470737 LSM1O15116 133 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms