RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-205	ENST00000470197	TTC19	Q6DKK2	380 aa	Predicted RBP	4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	CAPRIN2	Q6IMN6	1127 aa	Known RBP	4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197		Q6ZPB1	254 aa	Predicted RBP	4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	RFPL4B	Q6ZWI9	263 aa		4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	DNAJA4	Q8WW22	397 aa	Predicted RBP	4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	ISG20	Q96AZ6	181 aa	Known RBP	4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	PLIN2	Q99541	437 aa		4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	ERVK-6	Q9BXR3	956 aa		4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	NXF3	Q9H4D5	531 aa	Known RBP	4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	FANCE	Q9HB96	536 aa		4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	ZNF160	Q9HCG1	818 aa		4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	HEBP1	Q9NRV9	189 aa		4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	TBC1D24	Q9ULP9	559 aa		4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	TIMM10B	Q9Y5J6	103 aa		4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	ARPC1B	O15143	372 aa	Known RBP	4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	CDK2AP2	O75956	126 aa		4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	ANGPTL1	O95841	491 aa		4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	TGM6	O95932	706 aa		4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	FH	P07954	510 aa		4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	CERS1	P27544	350 aa		4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	CXCL12	P48061	93 aa		4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	SEL1L2	Q5TEA6	688 aa		4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	CARD17	Q5XLA6	110 aa		4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	ZNF486	Q96H40	463 aa	Predicted RBP	4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	MCCC2	Q9HCC0	563 aa		4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	IL1RAP	Q9NPH3	570 aa		4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	NLGN3	Q9NZ94	848 aa		4.09	□□□□□ -1.75
GCFC2-205	ENST00000470197	OR5H15	A6NDH6	313 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	TCP11X1	B4DZS4	312 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	ZNF195	O14628	629 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	NEMF	O60524	1076 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	PROP1	O75360	226 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	CRYGB	P07316	175 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	ACAA1	P09110	424 aa	Predicted RBP	4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	GSTA2	P09210	222 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	ERVK-10	P10266	1014 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	RALB	P11234	206 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	CCDC130	P13994	396 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	CEACAM8	P31997	349 aa	Predicted RBP	4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	UGT1A5	P35504	534 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	NUMB	P49757	651 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	ATP5I	P56385	69 aa	Predicted RBP	4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	ACSM5	Q6NUN0	579 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	ARMCX5	Q6P1M9	558 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	FAM184A	Q8NB25	1140 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	ZNRF1	Q8ND25	227 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	C16orf52	Q8NHV5	167 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	SORCS1	Q8WY21	1168 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	DCTN5	Q9BTE1	182 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	C8orf33	Q9H7E9	229 aa	Predicted RBP	4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	ZNF446	Q9NWS9	450 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	ATRX	P46100	2492 aa		4.09	□□□□□ -1.76
GCFC2-205	ENST00000470197	TRAV25	A0A0B4J276	109 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	PPIAL4C	A0A0B4J2A2	164 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197		G3V2L1	256 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197		I3L4J1	428 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197		K7ERI5	159 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	CLDN5	O00501	218 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	FCER2	P06734	321 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	PPIAL4G	P0DN37	164 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	ERVK-8	P63133	956 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	SPAG1	Q07617	926 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	PEX6	Q13608	980 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	SLC5A12	Q1EHB4	618 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	WDR38	Q5JTN6	314 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	GGN	Q86UU5	652 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	CENPS	Q8N2Z9	138 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	PRSS3P2	Q8NHM4	247 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	NTN5	Q8WTR8	489 aa	Predicted RBP	4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	FGF14	Q92915	247 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	OMD	Q99983	421 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	SYNDIG1	Q9H7V2	258 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	POLD4	Q9HCU8	107 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	VDAC3	Q9Y277	283 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	ASXL3	Q9C0F0	2248 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	MYH7B	A7E2Y1	1941 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	DFFB	O76075	338 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	NADK	O95544	446 aa	Predicted RBP	4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	SLC10A2	Q12908	348 aa	Predicted RBP	4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	SLC17A1	Q14916	467 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	ETFDH	Q16134	617 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	WSCD1	Q658N2	575 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	TCEAL6	Q6IPX3	200 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	UNQ6126/PRO20091	Q6UXV3	157 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	PYROXD2	Q8N2H3	581 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	C8orf46	Q8TAG6	207 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	ITFG1	Q8TB96	612 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	MTCH1	Q9NZJ7	389 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	MUC3A	Q02505	3323 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	MYH7	P12883	1935 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	IGLV5-45	A0A087WSX0	123 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	FBLL1	A6NHQ2	334 aa	Known RBP	4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	B4GALT5	O43286	388 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	AGT	P01019	485 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	TPM1	P09493	284 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	ATP1B2	P14415	290 aa	Predicted RBP	4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	CCNE1	P24864	410 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	GPR17	Q13304	367 aa		4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms