RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 ROPN1LQ96C74 230 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 ZG16BQ96DA0 208 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 SH3YL1Q96HL8 342 aaPredicted RBP10.02□□□□□ -0.81
COL4A6-205ENST00000468338 WNT10AQ9GZT5 417 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 LAT2Q9GZY6 243 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 RNF122Q9H9V4 155 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 ZNF446Q9NWS9 450 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 KCNN3Q9UGI6 736 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 MKLN1Q9UL63 735 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 LIPT1Q9Y234 373 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 CARD8Q9Y2G2 431 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 L3MBTL1Q9Y468 752 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 SLC22A20A6NK97 555 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 RFXANKO14593 260 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 POLR3GO15318 223 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-205ENST00000468338 ZNF264O43296 627 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 GMFGO60234 142 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 KRT75O95678 551 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 GSNP06396 782 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 PRKCAP17252 672 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 HOXB9P17482 250 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-205ENST00000468338 ELK4P28324 431 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 CHI3L1P36222 383 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-205ENST00000468338 PGM1P36871 562 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 PEX19P40855 299 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 ZNF41P51814 821 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-205ENST00000468338 AQP5P55064 265 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 IRX1P78414 480 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-205ENST00000468338 SKP2Q13309 424 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 FGFBP1Q14512 234 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 MAPK11Q15759 364 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 TOMM34Q15785 309 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-205ENST00000468338 ATAD3BQ5T9A4 648 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 OR2A2Q6IF42 318 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 GRAMD2AQ8IUY3 354 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 UBQLNLQ8IYU4 475 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 ZNF619Q8N2I2 560 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 OR5W2Q8NH69 310 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 DYDC1Q8WWB3 177 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 EDARADDQ8WWZ3 215 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 FIG4Q92562 907 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 GTF2H4Q92759 462 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 PMM1Q92871 262 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 VPS33AQ96AX1 596 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 INTS12Q96CB8 462 aaKnown RBP10.01□□□□□ -0.81
COL4A6-205ENST00000468338 WDR89Q96FK6 387 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-205ENST00000468338 ZNF845Q96IR2 970 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-205ENST00000468338 ITCHQ96J02 903 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 RNF145Q96MT1 663 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 TRNT1Q96Q11 434 aaKnown RBP10.01□□□□□ -0.81
COL4A6-205ENST00000468338 SLC38A1Q9H2H9 487 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 MCCC2Q9HCC0 563 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 STOML1Q9UBI4 398 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 WDR45Q9Y484 360 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 GMEB1Q9Y692 573 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 CSMD1Q96PZ7 3565 aa10.01□□□□□ -0.81
COL4A6-205ENST00000468338 AKAP6Q13023 2319 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 POLQO75417 2590 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 A0A0J9YW62 118 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 LOC100289279A0A1B0GTE1 492 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 A0A1W2PNV4 684 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 A8MXE2 369 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 GTPBP1O00178 669 aaKnown RBP10□□□□□ -0.81
COL4A6-205ENST00000468338 SEC14L5O43304 696 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 EDF1O60869 148 aaKnown RBP10□□□□□ -0.81
COL4A6-205ENST00000468338 H6PDO95479 791 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 CHRM4P08173 479 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 UBL4AP11441 157 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 IL11P20809 199 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 RPS4Y1P22090 263 aaKnown RBP10□□□□□ -0.81
COL4A6-205ENST00000468338 KIR2DL2P43627 348 aaPredicted RBP10□□□□□ -0.81
COL4A6-205ENST00000468338 ATP4BP51164 291 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 AGFG1P52594 562 aaKnown RBP10□□□□□ -0.81
COL4A6-205ENST00000468338 RPS3AP61247 264 aaKnown RBP10□□□□□ -0.81
COL4A6-205ENST00000468338 KCNJ10P78508 379 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 CHRNEQ04844 493 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 FOXF1Q12946 379 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 SYPL1Q16563 259 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 NDUFAF6Q330K2 333 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 TIGD2Q4W5G0 525 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 LRRC74BQ6ZQY2 392 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 ESPNLQ6ZVH7 1005 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 EIF3MQ7L2H7 374 aaKnown RBP10□□□□□ -0.81
COL4A6-205ENST00000468338 CHMP1BQ7LBR1 199 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 ANKFN1Q8N957 763 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 FNDC9Q8TBE3 224 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 STARD4Q96DR4 205 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 MRGPRX4Q96LA9 322 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 PINK1Q9BXM7 581 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 PAIP1Q9H074 479 aaKnown RBP10□□□□□ -0.81
COL4A6-205ENST00000468338 PIGMQ9H3S5 423 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 RMND5AQ9H871 391 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 TPT1P8Q9HAU6 139 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 PAQR5Q9NXK6 330 aaPredicted RBP10□□□□□ -0.81
COL4A6-205ENST00000468338 SLC35A3Q9Y2D2 325 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 PDZD2O15018 2839 aa10□□□□□ -0.81
COL4A6-205ENST00000468338 FREM1Q5H8C1 2179 aa9.99□□□□□ -0.81
COL4A6-205ENST00000468338 LRBAP50851 2863 aa9.99□□□□□ -0.81
COL4A6-205ENST00000468338 AGAP5A6NIR3 686 aa9.99□□□□□ -0.81
COL4A6-205ENST00000468338 MSTNO14793 375 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms