RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 KRTAP21-3Q3LHN1 58 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 PRSS57Q6UWY2 283 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 TFAP2EQ6VUC0 442 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 UBE2J2Q8N2K1 259 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 ANKRD42Q8N9B4 389 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 OR8J2Q8NGG1 315 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 HSD17B8Q92506 261 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 AKAP1Q92667 903 aaKnown RBP eCLIP15.6■□□□□ 0.09
COL7A1-206ENST00000466591 GTPBP3Q969Y2 492 aaKnown RBP15.6■□□□□ 0.09
COL7A1-206ENST00000466591 ZBTB9Q96C00 473 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 ARSGQ96EG1 525 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 USB1Q9BQ65 265 aaKnown RBP15.6■□□□□ 0.09
COL7A1-206ENST00000466591 QRSL1Q9H0R6 528 aaKnown RBP15.6■□□□□ 0.09
COL7A1-206ENST00000466591 EMC3Q9P0I2 261 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 SLC35A3Q9Y2D2 325 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 RNF115Q9Y4L5 304 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 MTORP42345 2549 aa15.6■□□□□ 0.09
COL7A1-206ENST00000466591 SULT2B1O00204 365 aa15.59■□□□□ 0.09
COL7A1-206ENST00000466591 HS3ST1O14792 307 aa15.59■□□□□ 0.09
COL7A1-206ENST00000466591 NTN1O95631 604 aa15.59■□□□□ 0.09
COL7A1-206ENST00000466591 ATP5J2P56134 94 aa15.59■□□□□ 0.09
COL7A1-206ENST00000466591 NME5P56597 212 aa15.59■□□□□ 0.09
COL7A1-206ENST00000466591 SESN3P58005 492 aa15.59■□□□□ 0.09
COL7A1-206ENST00000466591 PPP2R2BQ00005 443 aa15.59■□□□□ 0.09
COL7A1-206ENST00000466591 GNA13Q14344 377 aa15.59■□□□□ 0.09
COL7A1-206ENST00000466591 P2RY6Q15077 328 aa15.59■□□□□ 0.09
COL7A1-206ENST00000466591 SFRP5Q5T4F7 317 aa15.59■□□□□ 0.09
COL7A1-206ENST00000466591 C22orf34Q6ZV56 151 aa15.59■□□□□ 0.09
COL7A1-206ENST00000466591 BHLHA15Q7RTS1 189 aaPredicted RBP15.59■□□□□ 0.09
COL7A1-206ENST00000466591 MREGQ8N565 214 aa15.59■□□□□ 0.09
COL7A1-206ENST00000466591 SLC25A43Q8WUT9 341 aaPredicted RBP15.59■□□□□ 0.09
COL7A1-206ENST00000466591 RAB8BQ92930 207 aa15.59■□□□□ 0.09
COL7A1-206ENST00000466591 MUCL1Q96DR8 90 aa15.59■□□□□ 0.09
COL7A1-206ENST00000466591 SLC35A5Q9BS91 424 aa15.59■□□□□ 0.09
COL7A1-206ENST00000466591 POTEKPQ9BYX7 375 aa15.59■□□□□ 0.09
COL7A1-206ENST00000466591 COQ10BQ9H8M1 238 aa15.59■□□□□ 0.09
COL7A1-206ENST00000466591 SSU72Q9NP77 194 aaKnown RBP15.59■□□□□ 0.09
COL7A1-206ENST00000466591 LAMP3Q9UQV4 416 aa15.59■□□□□ 0.09
COL7A1-206ENST00000466591 ESPNB1AK53 854 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 C9JVG2 144 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 E9PBE3 544 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 NPIPB9F8W1W9 429 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 ANKRD28O15084 1053 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 KLF4O43474 513 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 FCMRO60667 390 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 UGT2B17O75795 530 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 HEXAP06865 529 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 UQCRBP14927 111 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 HOXB4P17483 251 aaPredicted RBP15.58■□□□□ 0.08
COL7A1-206ENST00000466591 RPS4XP62701 263 aaKnown RBP15.58■□□□□ 0.08
COL7A1-206ENST00000466591 SKP2Q13309 424 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 ITGADQ13349 1161 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 ZNF141Q15928 474 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 FAM174BQ3ZCQ3 159 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 OLIG3Q7RTU3 272 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 GALNT5Q7Z7M9 940 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 KRTAP1-3Q8IUG1 177 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 ARFGAP2Q8N6H7 521 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 FBXW5Q969U6 566 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 ZNF775Q96BV0 537 aaPredicted RBP15.58■□□□□ 0.08
COL7A1-206ENST00000466591 ROPN1LQ96C74 230 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 TRMT61AQ96FX7 289 aaKnown RBP15.58■□□□□ 0.08
COL7A1-206ENST00000466591 MARK4Q96L34 752 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 PANX1Q96RD7 426 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 PARD6BQ9BYG5 372 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 GSX2Q9BZM3 304 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 ZNF350Q9GZX5 532 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 ALG2Q9H553 416 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 CACYBPQ9HB71 228 aaKnown RBP15.58■□□□□ 0.08
COL7A1-206ENST00000466591 POLE3Q9NRF9 147 aa15.58■□□□□ 0.08
COL7A1-206ENST00000466591 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.58■□□□□ 0.08
COL7A1-206ENST00000466591 TRIM64A6NGJ6 449 aa15.57■□□□□ 0.08
COL7A1-206ENST00000466591 TRIM64BA6NI03 449 aa15.57■□□□□ 0.08
COL7A1-206ENST00000466591 EFNA2O43921 213 aa15.57■□□□□ 0.08
COL7A1-206ENST00000466591 LYZL6O75951 148 aa15.57■□□□□ 0.08
COL7A1-206ENST00000466591 PLAUP00749 431 aa15.57■□□□□ 0.08
COL7A1-206ENST00000466591 APOBEC1P41238 236 aaKnown RBP15.57■□□□□ 0.08
COL7A1-206ENST00000466591 DIO1P49895 249 aa15.57■□□□□ 0.08
COL7A1-206ENST00000466591 SYT14P1Q58G82 188 aa15.57■□□□□ 0.08
COL7A1-206ENST00000466591 SLC25A53Q5H9E4 307 aa15.57■□□□□ 0.08
COL7A1-206ENST00000466591 SPANXN4Q5MJ08 99 aa15.57■□□□□ 0.08
COL7A1-206ENST00000466591 NXNQ6DKJ4 435 aa15.57■□□□□ 0.08
COL7A1-206ENST00000466591 GABRG1Q8N1C3 465 aa15.57■□□□□ 0.08
COL7A1-206ENST00000466591 ZNF611Q8N823 705 aa15.57■□□□□ 0.08
COL7A1-206ENST00000466591 TESCQ96BS2 214 aa15.57■□□□□ 0.08
COL7A1-206ENST00000466591 SERHL2Q9H4I8 314 aa15.57■□□□□ 0.08
COL7A1-206ENST00000466591 ACER3Q9NUN7 267 aa15.57■□□□□ 0.08
COL7A1-206ENST00000466591 A0A1W2PP18 115 aa15.56■□□□□ 0.08
COL7A1-206ENST00000466591 CIB4A0PJX0 185 aa15.56■□□□□ 0.08
COL7A1-206ENST00000466591 KIAA0513O60268 411 aa15.56■□□□□ 0.08
COL7A1-206ENST00000466591 TMCC2O75069 709 aa15.56■□□□□ 0.08
COL7A1-206ENST00000466591 LY6G6DO95868 133 aa15.56■□□□□ 0.08
COL7A1-206ENST00000466591 CCNA2P20248 432 aa15.56■□□□□ 0.08
COL7A1-206ENST00000466591 TAB1Q15750 504 aa15.56■□□□□ 0.08
COL7A1-206ENST00000466591 TYW3Q6IPR3 259 aaKnown RBP15.56■□□□□ 0.08
COL7A1-206ENST00000466591 ZNF621Q6ZSS3 439 aa15.56■□□□□ 0.08
COL7A1-206ENST00000466591 Q6ZT83 130 aa15.56■□□□□ 0.08
COL7A1-206ENST00000466591 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.56■□□□□ 0.08
COL7A1-206ENST00000466591 HMGN2P46Q86SG4 172 aa15.56■□□□□ 0.08
COL7A1-206ENST00000466591 MGARPQ8TDB4 240 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms