RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 HMG20AQ9NP66 347 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 AKIP1Q9NQ31 210 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 FBXO4Q9UKT5 387 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 CFL2Q9Y281 166 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 MED31Q9Y3C7 131 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 FRG2CA6NGY1 282 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 KDM4EB2RXH2 506 aaPredicted RBP16.78■□□□□ 0.28
COL9A3-205ENST00000466192 M0R296 226 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 CER1O95813 267 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 LIMK1P53667 647 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 CDH11P55287 796 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 RAB40BQ12829 278 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 C1DQ13901 141 aaKnown RBP16.78■□□□□ 0.28
COL9A3-205ENST00000466192 LPAL2Q16609 132 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 ALG10BQ5I7T1 473 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 RNLSQ5VYX0 342 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 SLC23A3Q6PIS1 610 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 KIRREL2Q6UWL6 708 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 PRR23CQ6ZRP0 262 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 C9orf40Q8IXQ3 194 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 CADM2Q8N3J6 435 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 PLPP5Q8NEB5 264 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 OR6Q1Q8NGQ2 317 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 MCFD2Q8NI22 146 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 FANK1Q8TC84 345 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 STT3BQ8TCJ2 826 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 BPIFA2Q96DR5 249 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 ZNF426Q9BUY5 554 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 TGIF2Q9GZN2 237 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 NRSN2Q9GZP1 204 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 ENKD1Q9H0I2 346 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 C2orf92A0A1B0GVN3 265 aa16.77■□□□□ 0.28
COL9A3-205ENST00000466192 SCRG1O75711 98 aa16.77■□□□□ 0.28
COL9A3-205ENST00000466192 SAGP10523 405 aaPredicted RBP16.77■□□□□ 0.28
COL9A3-205ENST00000466192 MYL12AP19105 171 aa16.77■□□□□ 0.28
COL9A3-205ENST00000466192 ZNF846Q147U1 533 aa16.77■□□□□ 0.28
COL9A3-205ENST00000466192 EBPQ15125 230 aaKnown RBP16.77■□□□□ 0.28
COL9A3-205ENST00000466192 TIMM50Q3ZCQ8 353 aa16.77■□□□□ 0.28
COL9A3-205ENST00000466192 FAAH2Q6GMR7 532 aa16.77■□□□□ 0.28
COL9A3-205ENST00000466192 TMPRSS11FQ6ZWK6 438 aa16.77■□□□□ 0.28
COL9A3-205ENST00000466192 IGFN1Q86VF2 1251 aa16.77■□□□□ 0.28
COL9A3-205ENST00000466192 PRR22Q8IZ63 422 aa16.77■□□□□ 0.28
COL9A3-205ENST00000466192 CDK20Q8IZL9 346 aa16.77■□□□□ 0.28
COL9A3-205ENST00000466192 C7orf57Q8NEG2 295 aa16.77■□□□□ 0.28
COL9A3-205ENST00000466192 KBTBD8Q8NFY9 601 aa16.77■□□□□ 0.28
COL9A3-205ENST00000466192 OTULINQ96BN8 352 aa16.77■□□□□ 0.28
COL9A3-205ENST00000466192 UBQLN4Q9NRR5 601 aa16.77■□□□□ 0.28
COL9A3-205ENST00000466192 MRPS18AQ9NVS2 196 aaKnown RBP16.77■□□□□ 0.28
COL9A3-205ENST00000466192 RARRES3Q9UL19 164 aa16.77■□□□□ 0.28
COL9A3-205ENST00000466192 CFAP54Q96N23 3096 aa16.77■□□□□ 0.27
COL9A3-205ENST00000466192 WWP2O00308 870 aa16.77■□□□□ 0.27
COL9A3-205ENST00000466192 CBFA2T3O75081 653 aa16.77■□□□□ 0.27
COL9A3-205ENST00000466192 NGFRP08138 427 aa16.77■□□□□ 0.27
COL9A3-205ENST00000466192 CTBP2P56545 445 aa16.77■□□□□ 0.27
COL9A3-205ENST00000466192 DAB2P98082 770 aa16.77■□□□□ 0.27
COL9A3-205ENST00000466192 FNDC7Q5VTL7 733 aa16.77■□□□□ 0.27
COL9A3-205ENST00000466192 SMARCD3Q6STE5 483 aa16.77■□□□□ 0.27
COL9A3-205ENST00000466192 LINC00114Q6XXX2 140 aa16.77■□□□□ 0.27
COL9A3-205ENST00000466192 LINC00299Q6ZSB3 139 aa16.77■□□□□ 0.27
COL9A3-205ENST00000466192 GATSQ8NAP1 163 aa16.77■□□□□ 0.27
COL9A3-205ENST00000466192 BBS1Q8NFJ9 593 aa16.77■□□□□ 0.27
COL9A3-205ENST00000466192 BRIX1Q8TDN6 353 aaKnown RBP16.77■□□□□ 0.27
COL9A3-205ENST00000466192 HS6ST2Q96MM7 605 aa16.77■□□□□ 0.27
COL9A3-205ENST00000466192 GTPBP2Q9BX10 602 aaKnown RBP16.77■□□□□ 0.27
COL9A3-205ENST00000466192 SMOC1Q9H4F8 434 aa16.77■□□□□ 0.27
COL9A3-205ENST00000466192 FBXO8Q9NRD0 319 aa16.77■□□□□ 0.27
COL9A3-205ENST00000466192 IGLV3-12A0A075B6K2 115 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 CDC14CA4D256 554 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 FAM183AA6NL82 134 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 EFCAB7A8K855 629 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 GPX5O75715 221 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 BMP7P18075 431 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 TBXA2RP21731 343 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 CD226Q15762 336 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 ZNF404Q494X3 552 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 NKAIN1Q4KMZ8 207 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 C3orf38Q5JPI3 329 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 AADACL4Q5VUY2 407 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 DESI1Q6ICB0 168 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 APOOLQ6UXV4 268 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 BMP8AQ7Z5Y6 402 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 OR52L1Q8NGH7 329 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 OR1N1Q8NGS0 311 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 OR13C2Q8NGS9 318 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 RFKQ969G6 155 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 ART5Q96L15 291 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 WDR12Q9GZL7 423 aaKnown RBP16.76■□□□□ 0.27
COL9A3-205ENST00000466192 APMAPQ9HDC9 416 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 EXOSC4Q9NPD3 245 aaKnown RBP16.76■□□□□ 0.27
COL9A3-205ENST00000466192 TMEM5Q9Y2B1 443 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 SLC35A3Q9Y2D2 325 aa16.76■□□□□ 0.27
COL9A3-205ENST00000466192 UTS2O95399 124 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 HMGN1P05114 100 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 BMP4P12644 408 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 ITGADQ13349 1161 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 SLC35F1Q5T1Q4 408 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 PHF19Q5T6S3 580 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 OR2G6Q5TZ20 316 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 LIPKQ5VXJ0 399 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 ULK3Q6PHR2 472 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms