RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 SPATA9Q9BWV2 254 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 HHATLQ9HCP6 504 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 CTPS2Q9NRF8 586 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 GID8Q9NWU2 228 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 CMTM6Q9NX76 183 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 COQ3Q9NZJ6 369 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 PLEKHB1Q9UF11 243 aaPredicted RBP10.49□□□□□ -0.73
CUX1-207ENST00000465461 ZNF232Q9UNY5 417 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 GPC6Q9Y625 555 aaPredicted RBP10.49□□□□□ -0.73
CUX1-207ENST00000465461 FLNCQ14315 2725 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 PCNX1Q96RV3 2341 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 USP9XQ93008 2570 aaPredicted RBP10.48□□□□□ -0.73
CUX1-207ENST00000465461 A0A1W2PNR3 127 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 CFAP73A6NFT4 308 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 CD8B2A6NJW9 211 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 PRSS44E7EML9 344 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 C19orf84I3L1E1 186 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 LINC01387J3KSC0 135 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 M0QX08 132 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 CLDN14O95500 239 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 THBS1P07996 1170 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 HOXD4P09016 255 aaPredicted RBP10.48□□□□□ -0.73
CUX1-207ENST00000465461 GP1BBP13224 206 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 ETS2P15036 469 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 CEACAM8P31997 349 aaPredicted RBP10.48□□□□□ -0.73
CUX1-207ENST00000465461 PTGER4P35408 488 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 EIF1P41567 113 aaKnown RBP10.48□□□□□ -0.73
CUX1-207ENST00000465461 ACAA2P42765 397 aaKnown RBP10.48□□□□□ -0.73
CUX1-207ENST00000465461 SLC6A8P48029 635 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 NUDT2P50583 147 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 ZNF136P52737 540 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 DMTNQ08495 405 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 LARS2Q15031 903 aaKnown RBP10.48□□□□□ -0.73
CUX1-207ENST00000465461 PON3Q15166 354 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 SGCBQ16585 318 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 SLC25A53Q5H9E4 307 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 RIPPLY2Q5TAB7 128 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 PRAMEF8Q5VWM4 474 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 PRAMEF7Q5VXH5 474 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 XKRXQ6PP77 449 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 P4HA3Q7Z4N8 544 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 ADGRE4PQ86SQ3 457 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 CALHM3Q86XJ0 350 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 GRAMD2AQ8IUY3 354 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 LACC1Q8IV20 430 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 GCNT2Q8N0V5 402 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 CADM2Q8N3J6 435 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 METTL25Q8N6Q8 603 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 C11orf65Q8NCR3 313 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 OR8J3Q8NGG0 315 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 OR10D3Q8NH80 312 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 OIT3Q8WWZ8 545 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 PMM1Q92871 262 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 INTS12Q96CB8 462 aaKnown RBP10.48□□□□□ -0.73
CUX1-207ENST00000465461 ADGRG7Q96K78 797 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 MRGPRX4Q96LA9 322 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 KLHL15Q96M94 604 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 ZNF583Q96ND8 569 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 GPATCH1Q9BRR8 931 aaKnown RBP10.48□□□□□ -0.73
CUX1-207ENST00000465461 CALHM2Q9HA72 323 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 CACYBPQ9HB71 228 aaKnown RBP10.48□□□□□ -0.73
CUX1-207ENST00000465461 EXOSC3Q9NQT5 275 aaKnown RBP10.48□□□□□ -0.73
CUX1-207ENST00000465461 ACER3Q9NUN7 267 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 ARL8BQ9NVJ2 186 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 CLCF1Q9UBD9 225 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 ANGPT4Q9Y264 503 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 IFT52Q9Y366 437 aa10.48□□□□□ -0.73
CUX1-207ENST00000465461 MBD3L4A6NDZ8 208 aaPredicted RBP10.47□□□□□ -0.73
CUX1-207ENST00000465461 MBD3L3A6NE82 208 aaPredicted RBP10.47□□□□□ -0.73
CUX1-207ENST00000465461 MBD3L5A6NJ08 208 aaPredicted RBP10.47□□□□□ -0.73
CUX1-207ENST00000465461 SHOX2O60902 331 aaPredicted RBP10.47□□□□□ -0.73
CUX1-207ENST00000465461 AQP8O94778 261 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 MFN2O95140 757 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 FAM107AO95990 144 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 NPPAP01160 153 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 IL2RAP01589 272 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 KLK2P20151 261 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 ME2P23368 584 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 ADH6P28332 368 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 HTR1EP28566 365 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 TACR3P29371 465 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 TIMP3P35625 211 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 RBBP4Q09028 425 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 ART3Q13508 389 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 VMACQ2NL98 169 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 RNF220Q5VTB9 566 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 HBMQ6B0K9 141 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 MAMDC2Q7Z304 686 aaPredicted RBP10.47□□□□□ -0.73
CUX1-207ENST00000465461 ADGRG3Q86Y34 549 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 KRT73Q86Y46 540 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 SLC15A3Q8IY34 581 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 OR2V1Q8NHB1 315 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 MBD3L2Q8NHZ7 208 aaPredicted RBP10.47□□□□□ -0.73
CUX1-207ENST00000465461 FNDC9Q8TBE3 224 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 TMEM234Q8WY98 164 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 ROBO4Q8WZ75 1007 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 ST8SIA1Q92185 356 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 OSTF1Q92882 214 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 WNT2BQ93097 391 aa10.47□□□□□ -0.73
CUX1-207ENST00000465461 SH3GL1Q99961 368 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms