RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 RND1Q92730 232 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 NTNG2Q96CW9 530 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 NSMCE2Q96MF7 247 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 TTTY12Q9BZ98 90 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 DEFB127Q9H1M4 99 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 ACTR3BQ9P1U1 418 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 DKKL1Q9UK85 242 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 CELSR1Q9NYQ6 3014 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 PINLYPA6NC86 204 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 NKX2-6A6NCS4 301 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 G3V3Y1 287 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 GNB5O14775 395 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 CIB2O75838 187 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 CYP7B1O75881 506 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 TOXO94900 526 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 LINGO3P0C6S8 592 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 UBTFL6P0CB48 400 aaPredicted RBP15.81■□□□□ 0.12
CPSF4-209ENST00000465132 GDF1P27539 372 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 SRD5A2P31213 254 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 EEF1A1P68104 462 aaKnown RBP15.81■□□□□ 0.12
CPSF4-209ENST00000465132 CEACAM7Q14002 265 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 SLC10A1Q14973 349 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 TOMM20Q15388 145 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 MAPK14Q16539 360 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 MRPL2Q5T653 305 aaKnown RBP15.81■□□□□ 0.12
CPSF4-209ENST00000465132 DESI1Q6ICB0 168 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 RANBP3LQ86VV4 465 aaPredicted RBP15.81■□□□□ 0.12
CPSF4-209ENST00000465132 DHFR2Q86XF0 187 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 C10orf67Q8IYJ2 551 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 ZBTB8AQ96BR9 441 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 ARSGQ96EG1 525 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 RAB3IPQ96QF0 476 aaPredicted RBP15.81■□□□□ 0.12
CPSF4-209ENST00000465132 UCK2Q9BZX2 261 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 QRSL1Q9H0R6 528 aaKnown RBP15.81■□□□□ 0.12
CPSF4-209ENST00000465132 PROK2Q9HC23 129 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 FLRT3Q9NZU0 649 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 KCNE5Q9UJ90 142 aa15.81■□□□□ 0.12
CPSF4-209ENST00000465132 CFAP73A6NFT4 308 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 FAM90A27PA6NNH2 459 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 FAM166BA8MTA8 275 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 FAAHO00519 579 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 GLSO94925 669 aaPredicted RBP15.8■□□□□ 0.12
CPSF4-209ENST00000465132 FKBP2P26885 142 aaKnown RBP15.8■□□□□ 0.12
CPSF4-209ENST00000465132 DPP4P27487 766 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 HTR3AP46098 478 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 KCNJ5P48544 419 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 CCR4P51679 360 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 SELENOWP63302 87 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 ZNF117Q03924 483 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 PMPCAQ10713 525 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 FOXO1Q12778 655 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 ZSCAN26Q16670 478 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 CYBRD1Q53TN4 286 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 FNDC7Q5VTL7 733 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 APOOLQ6UXV4 268 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 ZNF836Q6ZNA1 936 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 VRK2Q86Y07 508 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 CCDC71Q8IV32 467 aaPredicted RBP15.8■□□□□ 0.12
CPSF4-209ENST00000465132 FADS6Q8N9I5 356 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 WDSUB1Q8N9V3 476 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 GATSQ8NAP1 163 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 FAM71CQ8NEG0 241 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 ZG16BQ96DA0 208 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 GNRHR2Q96P88 292 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 DSN1Q9H410 356 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 ZDHHC11Q9H8X9 412 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 ACKR4Q9NPB9 350 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 KCNJ16Q9NPI9 418 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 EGFL7Q9UHF1 273 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 CARD8Q9Y2G2 431 aa15.8■□□□□ 0.12
CPSF4-209ENST00000465132 A0A0G2JMM0 328 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 A0A1W2PPB8 328 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 A0A1W2PRS3 328 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 KIR3DP1A8MWS1 328 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 HCN1O60741 890 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 TRAPPC6AO75865 159 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 ZNF682O95780 498 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 NUP107P57740 925 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 RGS8P57771 180 aaPredicted RBP15.79■□□□□ 0.12
CPSF4-209ENST00000465132 SKP2Q13309 424 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 CD226Q15762 336 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 FKBP9P1Q75LS8 142 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 OLIG3Q7RTU3 272 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 DMRTC2Q8IXT2 367 aaPredicted RBP15.79■□□□□ 0.12
CPSF4-209ENST00000465132 ULK2Q8IYT8 1036 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 OR2M3Q8NG83 312 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 OR14L1PQ8NHC6 308 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 ZNF563Q8TA94 476 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 ST8SIA1Q92185 356 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 C1GALT1C1Q96EU7 318 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 SH3YL1Q96HL8 342 aaPredicted RBP15.79■□□□□ 0.12
CPSF4-209ENST00000465132 PIGQQ9BRB3 760 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 CADM1Q9BY67 442 aaKnown RBP15.79■□□□□ 0.12
CPSF4-209ENST00000465132 TRIM2Q9C040 744 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 POLR2J2Q9GZM3 115 aaKnown RBP15.79■□□□□ 0.12
CPSF4-209ENST00000465132 POLR2J3Q9H1A7 115 aaKnown RBP15.79■□□□□ 0.12
CPSF4-209ENST00000465132 LDAHQ9H6V9 325 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 ZNF703Q9H7S9 590 aaPredicted RBP15.79■□□□□ 0.12
CPSF4-209ENST00000465132 DCAF13Q9NV06 445 aaKnown RBP15.79■□□□□ 0.12
CPSF4-209ENST00000465132 DNAJB12Q9NXW2 375 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms