RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 LIMS1P48059 325 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 IDH2P48735 452 aaKnown RBP8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 P2RX1P51575 399 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 CDH12P55289 794 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 SUMO3P55854 103 aaPredicted RBP8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 RPP38P78345 283 aaKnown RBP8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 SPIBQ01892 262 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 C17orf67Q0P5P2 114 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 FOXF1Q12946 379 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 FOXD4Q12950 439 aaPredicted RBP8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 LAPTM4AQ15012 233 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 QPRTQ15274 297 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 SEC23BQ15437 767 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 OR1Q1Q15612 314 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 ATP6AP1Q15904 470 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 PLPPR5Q32ZL2 321 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 PRR30Q53SZ7 412 aaPredicted RBP8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 RNFT1Q5M7Z0 435 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 FBXW10Q5XX13 1052 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 ANKRD34AQ69YU3 496 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 TIGD3Q6B0B8 471 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 SLC25A25Q6KCM7 469 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 ZFP1Q6P2D0 407 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 AAGABQ6PD74 315 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 Q6ZS92 163 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 PLEKHM3Q6ZWE6 761 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 GDF7Q7Z4P5 450 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 RANBP3LQ86VV4 465 aaPredicted RBP8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 PLCZ1Q86YW0 608 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 ZNF440Q8IYI8 595 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 PQLC1Q8N2U9 271 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 CADM2Q8N3J6 435 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 OR4C15Q8NGM1 316 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 OR5M1Q8NGP8 315 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 POC1BQ8TC44 478 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 ADAMTS16Q8TE57 1224 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 C3orf49Q96BT1 292 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 C1GALT1C1Q96EU7 318 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 JSRP1Q96MG2 331 aaPredicted RBP8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 C5orf34Q96MH7 638 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 GNRHR2Q96P88 292 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 PIP5K1AQ99755 562 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 FAM173AQ9BQD7 235 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 PRSS27Q9BQR3 290 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 FUZQ9BT04 418 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 TTTY12Q9BZ98 90 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 SLC25A18Q9H1K4 315 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 SEMA6AQ9H2E6 1030 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 ADNPQ9H2P0 1102 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 UBQLN3Q9H347 655 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 TUBD1Q9UJT1 453 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 SLC7A7Q9UM01 511 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 VDAC3Q9Y277 283 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 C15orf41Q9Y2V0 281 aa8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 MAGED1Q9Y5V3 778 aaPredicted RBP8.14□□□□□ -1.11
NUDCD3-204ENST00000464812 COL12A1Q99715 3063 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 IGKV1D-42A0A075B6H8 117 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 FAM166BA8MTA8 275 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 B8ZZF3 427 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 ETV2O00321 342 aaPredicted RBP8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 FAAHO00519 579 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 CDK2AP1O14519 115 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 PIP5K1CO60331 668 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 FMO6PO60774 539 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 GLSO94925 669 aaPredicted RBP8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 SNX4O95219 450 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 OR5F1O95221 314 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 CST1P01037 141 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 CD46P15529 392 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 RHCEP18577 417 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 IL11P20809 199 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 ELAVL4P26378 380 aaKnown RBP8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 MASP1P48740 699 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 CLK3P49761 638 aaKnown RBP8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 TAS2R41P59536 307 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 CBFBQ13951 182 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 ZSWIM7Q19AV6 140 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 EXOC3L2Q2M3D2 409 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 OR2T5Q6IEZ7 315 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 ZNF550Q7Z398 422 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 ATG4DQ86TL0 474 aaPredicted RBP8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 NKAIN4Q8IVV8 208 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 HS3ST5Q8IZT8 346 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 LSMEM1Q8N8F7 131 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 PIK3C3Q8NEB9 887 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 TOR1AIP2Q8NFQ8 470 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 OR4K17Q8NGC6 315 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 OR1J4Q8NGS1 313 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 OR2T29Q8NH02 315 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 OR52J3Q8NH60 311 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 C9orf43Q8TAL5 461 aaPredicted RBP8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 POP5Q969H6 163 aaKnown RBP8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 SLC41A3Q96GZ6 507 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 ZNF559Q9BR84 538 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 ARMC7Q9H6L4 198 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 EVA1AQ9H8M9 152 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 RNPEPL1Q9HAU8 725 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 ZFP64Q9NPA5 681 aa8.13□□□□□ -1.11
NUDCD3-204ENST00000464812 SDHAF3Q9NRP4 125 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms