RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 COPZ1P61923 177 aa20■□□□□ 0.79
PDLIM2-216ENST00000464275 CCL7P80098 99 aa20■□□□□ 0.79
PDLIM2-216ENST00000464275 STEAP3Q658P3 488 aa20■□□□□ 0.79
PDLIM2-216ENST00000464275 SLITRK4Q8IW52 837 aa20■□□□□ 0.79
PDLIM2-216ENST00000464275 ZNF440Q8IYI8 595 aa20■□□□□ 0.79
PDLIM2-216ENST00000464275 MAML2Q8IZL2 1156 aaPredicted RBP20■□□□□ 0.79
PDLIM2-216ENST00000464275 PROKR2Q8NFJ6 384 aa20■□□□□ 0.79
PDLIM2-216ENST00000464275 OR52L1Q8NGH7 329 aa20■□□□□ 0.79
PDLIM2-216ENST00000464275 OR52I1Q8NGK6 324 aa20■□□□□ 0.79
PDLIM2-216ENST00000464275 OR9Q1Q8NGQ5 310 aa20■□□□□ 0.79
PDLIM2-216ENST00000464275 OR4C3Q8NH37 302 aa20■□□□□ 0.79
PDLIM2-216ENST00000464275 OR14A16Q8NHC5 309 aa20■□□□□ 0.79
PDLIM2-216ENST00000464275 FANK1Q8TC84 345 aa20■□□□□ 0.79
PDLIM2-216ENST00000464275 GAREM1Q9H706 876 aa20■□□□□ 0.79
PDLIM2-216ENST00000464275 HHATLQ9HCP6 504 aa20■□□□□ 0.79
PDLIM2-216ENST00000464275 ATP13A2Q9NQ11 1180 aa20■□□□□ 0.79
PDLIM2-216ENST00000464275 RPS6KB2Q9UBS0 482 aa20■□□□□ 0.79
PDLIM2-216ENST00000464275 GPR52Q9Y2T5 361 aa20■□□□□ 0.79
PDLIM2-216ENST00000464275 SYNDIG1LA6NDD5 238 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 FRG2CA6NGY1 282 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 TBX1O43435 398 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 RCBTB2O95199 551 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 TMED10P49755 219 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 DCAF7P61962 342 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 C1DQ13901 141 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 ALG10BQ5I7T1 473 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 ULK3Q6PHR2 472 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 BMP8AQ7Z5Y6 402 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 RABEPKQ7Z6M1 372 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 CCDC190Q86UF4 302 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 NANOGP1Q8N7R0 232 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 POC5Q8NA72 575 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 OR4D9Q8NGE8 314 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 DAZLQ92904 295 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 LCORQ96JN0 433 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 OPALINQ96PE5 141 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 ZNF426Q9BUY5 554 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 NUAK2Q9H093 628 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 FGF20Q9NP95 211 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 MRTO4Q9UKD2 239 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 TRAPPC4Q9Y296 219 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 CH25HO95992 272 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 CFIP05156 583 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 BMP7P18075 431 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 RAB40BQ12829 278 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 NSDHLQ15738 373 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 KLHL26Q53HC5 615 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 PRPF38BQ5VTL8 546 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 RHBDD2Q6NTF9 364 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 LINC00114Q6XXX2 140 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 C1orf210Q8IVY1 113 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 ZNF527Q8NB42 609 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 PLPP5Q8NEB5 264 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 CHAC2Q8WUX2 184 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 NAT6Q93015 286 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 RFKQ969G6 155 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 EFHD2Q96C19 240 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 ARSGQ96EG1 525 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 RNFT2Q96EX2 444 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 SLC7A5P2Q9GIP4 190 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 NXF5Q9H1B4 397 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 UBQLN3Q9H347 655 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 LRRN3Q9H3W5 708 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 MEPEQ9NQ76 525 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 UBQLN4Q9NRR5 601 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 PCDHGB6Q9Y5F9 930 aa19.99■□□□□ 0.79
PDLIM2-216ENST00000464275 A0A1W2PQM1 296 aa19.98■□□□□ 0.79
PDLIM2-216ENST00000464275 CSO75390 466 aaKnown RBP19.98■□□□□ 0.79
PDLIM2-216ENST00000464275 ZGLP1P0C6A0 271 aa19.98■□□□□ 0.79
PDLIM2-216ENST00000464275 PSMA1P25786 263 aaKnown RBP19.98■□□□□ 0.79
PDLIM2-216ENST00000464275 ADH7P40394 386 aa19.98■□□□□ 0.79
PDLIM2-216ENST00000464275 EFNA3P52797 238 aa19.98■□□□□ 0.79
PDLIM2-216ENST00000464275 SPHARQ15513 63 aa19.98■□□□□ 0.79
PDLIM2-216ENST00000464275 ADIPOR1Q96A54 375 aa19.98■□□□□ 0.79
PDLIM2-216ENST00000464275 NUDT9Q9BW91 350 aa19.98■□□□□ 0.79
PDLIM2-216ENST00000464275 CLEC2DQ9UHP7 191 aa19.98■□□□□ 0.79
PDLIM2-216ENST00000464275 APOA1P02647 267 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 CKMT1AP12532 417 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 GAS1P54826 345 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 MLLT11Q13015 90 aaPredicted RBP19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 SSX1Q16384 188 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 C3orf38Q5JPI3 329 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 AADACL4Q5VUY2 407 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 HSDL2Q6YN16 418 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 CACTIN-AS1Q8N1I8 211 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 CADM2Q8N3J6 435 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 ZC3H10Q96K80 434 aaKnown RBP19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 LMF1Q96S06 567 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 VN1R1Q9GZP7 353 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 MKL2Q9ULH7 1088 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 MYL12BO14950 172 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 TBXA2RP21731 343 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 MTNR1AP48039 350 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 FXYD6P3P58550 94 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 KIRREL2Q6UWL6 708 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 COX15Q7KZN9 410 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 EID2Q8N6I1 236 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 SETD6Q8TBK2 473 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 CEP19Q96LK0 163 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 TGIF2Q9GZN2 237 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms