RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 MUCL1Q96DR8 90 aa19.99■□□□□ 0.79
USP4-208ENST00000464168 PPP3R2Q96LZ3 170 aa19.99■□□□□ 0.79
USP4-208ENST00000464168 OR7D2Q96RA2 312 aa19.99■□□□□ 0.79
USP4-208ENST00000464168 SDF2Q99470 211 aa19.99■□□□□ 0.79
USP4-208ENST00000464168 NPAP1Q9NZP6 1156 aa19.99■□□□□ 0.79
USP4-208ENST00000464168 MID2Q9UJV3 735 aa19.99■□□□□ 0.79
USP4-208ENST00000464168 RNF212BA8MTL3 300 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 DNAJA2O60884 412 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 PEX11AO75192 247 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 PGM3O95394 542 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 UBL4AP11441 157 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 COX5AP20674 150 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 MAPK1P28482 360 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 CBFBQ13951 182 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 LSM12Q3MHD2 195 aaKnown RBP19.98■□□□□ 0.79
USP4-208ENST00000464168 TIGD2Q4W5G0 525 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 XKR7Q5GH72 579 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 TIMM23BQ5SRD1 257 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 PDZK1Q5T2W1 519 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 PODNL1Q6PEZ8 512 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 HOMEZQ8IX15 550 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 KRTCAP2Q8N6L1 136 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 SFXN5Q8TD22 340 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 EPS8L3Q8TE67 593 aaKnown RBP19.98■□□□□ 0.79
USP4-208ENST00000464168 OR5B2Q96R09 309 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 QRSL1Q9H0R6 528 aaKnown RBP19.98■□□□□ 0.79
USP4-208ENST00000464168 ATAD3AQ9NVI7 634 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 FAIMQ9NVQ4 179 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 KCNE5Q9UJ90 142 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 B3GALT5Q9Y2C3 310 aa19.98■□□□□ 0.79
USP4-208ENST00000464168 GOLGA8QA0A0J9YX86 632 aa19.97■□□□□ 0.79
USP4-208ENST00000464168 GOLGA8OA6NCC3 632 aa19.97■□□□□ 0.79
USP4-208ENST00000464168 GOLGA8NF8WBI6 632 aa19.97■□□□□ 0.79
USP4-208ENST00000464168 ABCD4O14678 606 aa19.97■□□□□ 0.79
USP4-208ENST00000464168 SSX4O60224 188 aa19.97■□□□□ 0.79
USP4-208ENST00000464168 LYPLA1O75608 230 aaPredicted RBP19.97■□□□□ 0.79
USP4-208ENST00000464168 IFNA2P01563 188 aa19.97■□□□□ 0.79
USP4-208ENST00000464168 GGT1P19440 569 aa19.97■□□□□ 0.79
USP4-208ENST00000464168 ALDH3A1P30838 453 aa19.97■□□□□ 0.79
USP4-208ENST00000464168 CCR4P51679 360 aa19.97■□□□□ 0.79
USP4-208ENST00000464168 CDH11P55287 796 aa19.97■□□□□ 0.79
USP4-208ENST00000464168 C3orf33Q6P1S2 294 aa19.97■□□□□ 0.79
USP4-208ENST00000464168 P2RY8Q86VZ1 359 aa19.97■□□□□ 0.79
USP4-208ENST00000464168 NATD1Q8N6N6 113 aa19.97■□□□□ 0.79
USP4-208ENST00000464168 ZNF433Q8N7K0 673 aaPredicted RBP19.97■□□□□ 0.79
USP4-208ENST00000464168 OR5D16Q8NGK9 328 aa19.97■□□□□ 0.79
USP4-208ENST00000464168 OR5AK3PQ8NH89 298 aa19.97■□□□□ 0.79
USP4-208ENST00000464168 C3orf30Q96M34 536 aa19.97■□□□□ 0.79
USP4-208ENST00000464168 C1orf50Q9BV19 199 aa19.97■□□□□ 0.79
USP4-208ENST00000464168 THUMPD3Q9BV44 507 aaKnown RBP19.97■□□□□ 0.79
USP4-208ENST00000464168 NMUR2Q9GZQ4 415 aa19.97■□□□□ 0.79
USP4-208ENST00000464168 LAT2Q9GZY6 243 aa19.97■□□□□ 0.79
USP4-208ENST00000464168 PPCSQ9HAB8 311 aa19.97■□□□□ 0.79
USP4-208ENST00000464168 SERINC4A6NH21 518 aa19.96■□□□□ 0.79
USP4-208ENST00000464168 OR5H1A6NKK0 313 aa19.96■□□□□ 0.79
USP4-208ENST00000464168 A8MV72 311 aaPredicted RBP19.96■□□□□ 0.79
USP4-208ENST00000464168 GPRIN2O60269 458 aa19.96■□□□□ 0.79
USP4-208ENST00000464168 NPHS1O60500 1241 aa19.96■□□□□ 0.79
USP4-208ENST00000464168 SESN3P58005 492 aa19.96■□□□□ 0.79
USP4-208ENST00000464168 SKP2Q13309 424 aa19.96■□□□□ 0.79
USP4-208ENST00000464168 C6orf136Q5SQH8 315 aa19.96■□□□□ 0.79
USP4-208ENST00000464168 SSX8Q7RTT4 187 aa19.96■□□□□ 0.79
USP4-208ENST00000464168 GALNT5Q7Z7M9 940 aa19.96■□□□□ 0.79
USP4-208ENST00000464168 RIMKLAQ8IXN7 391 aa19.96■□□□□ 0.79
USP4-208ENST00000464168 ZNF100Q8IYN0 542 aa19.96■□□□□ 0.79
USP4-208ENST00000464168 OR2W6PQ8NHA6 318 aa19.96■□□□□ 0.79
USP4-208ENST00000464168 UBLCP1Q8WVY7 318 aaPredicted RBP19.96■□□□□ 0.79
USP4-208ENST00000464168 ARL8AQ96BM9 186 aa19.96■□□□□ 0.79
USP4-208ENST00000464168 MOAP1Q96BY2 351 aa19.96■□□□□ 0.79
USP4-208ENST00000464168 RHNO1Q9BSD3 238 aa19.96■□□□□ 0.79
USP4-208ENST00000464168 IGHV4-30-2A0A087WSY4 118 aa19.95■□□□□ 0.78
USP4-208ENST00000464168 A0A096LNT2 108 aa19.95■□□□□ 0.78
USP4-208ENST00000464168 FCMRO60667 390 aa19.95■□□□□ 0.78
USP4-208ENST00000464168 SLU7O95391 586 aaKnown RBP19.95■□□□□ 0.78
USP4-208ENST00000464168 DIO1P49895 249 aa19.95■□□□□ 0.78
USP4-208ENST00000464168 RPS26P62854 115 aaKnown RBP19.95■□□□□ 0.78
USP4-208ENST00000464168 HBA1P69905 142 aa19.95■□□□□ 0.78
USP4-208ENST00000464168 IRX1P78414 480 aaPredicted RBP19.95■□□□□ 0.78
USP4-208ENST00000464168 ZNF141Q15928 474 aa19.95■□□□□ 0.78
USP4-208ENST00000464168 NRF1Q16656 503 aa19.95■□□□□ 0.78
USP4-208ENST00000464168 AGAP6Q5VW22 663 aa19.95■□□□□ 0.78
USP4-208ENST00000464168 IL23RQ5VWK5 629 aa19.95■□□□□ 0.78
USP4-208ENST00000464168 TMPPEQ6ZT21 453 aa19.95■□□□□ 0.78
USP4-208ENST00000464168 PHC2Q8IXK0 858 aa19.95■□□□□ 0.78
USP4-208ENST00000464168 OR10H5Q8NGA6 315 aa19.95■□□□□ 0.78
USP4-208ENST00000464168 AGR3Q8TD06 166 aa19.95■□□□□ 0.78
USP4-208ENST00000464168 ST8SIA1Q92185 356 aa19.95■□□□□ 0.78
USP4-208ENST00000464168 RADILQ96JH8 1075 aa19.95■□□□□ 0.78
USP4-208ENST00000464168 PRPF18Q99633 342 aaKnown RBP19.95■□□□□ 0.78
USP4-208ENST00000464168 MECRQ9BV79 373 aa19.95■□□□□ 0.78
USP4-208ENST00000464168 SERHL2Q9H4I8 314 aa19.95■□□□□ 0.78
USP4-208ENST00000464168 EML4Q9HC35 981 aaKnown RBP19.95■□□□□ 0.78
USP4-208ENST00000464168 IGKV3D-15A0A087WSY6 115 aa19.94■□□□□ 0.78
USP4-208ENST00000464168 CENPVL1A0A0U1RR11 272 aa19.94■□□□□ 0.78
USP4-208ENST00000464168 E7EQL1 145 aa19.94■□□□□ 0.78
USP4-208ENST00000464168 CFLARO15519 480 aa19.94■□□□□ 0.78
USP4-208ENST00000464168 CYP7B1O75881 506 aa19.94■□□□□ 0.78
USP4-208ENST00000464168 PRPS1L1P21108 318 aa19.94■□□□□ 0.78
USP4-208ENST00000464168 MERTKQ12866 999 aa19.94■□□□□ 0.78
USP4-208ENST00000464168 GPR68Q15743 365 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms