RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 LTB4RQ15722 352 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 ARHGAP40Q5TG30 622 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 ZNF730Q6ZMV8 503 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 MBOAT2Q6ZWT7 520 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 RRM2BQ7LG56 351 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 OLIG3Q7RTU3 272 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 WDR53Q7Z5U6 358 aaPredicted RBP9.14□□□□□ -0.95
PTPRD-207ENST00000463477 PHC2Q8IXK0 858 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 RNF113BQ8IZP6 322 aaKnown RBP9.14□□□□□ -0.95
PTPRD-207ENST00000463477 IQCF1Q8N6M8 205 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 ZSCAN1Q8NBB4 408 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 SLC38A9Q8NBW4 561 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 SLC16A11Q8NCK7 471 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 HOXB13Q92826 284 aaPredicted RBP9.14□□□□□ -0.95
PTPRD-207ENST00000463477 RFKQ969G6 155 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 WDFY2Q96P53 400 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 SDF2Q99470 211 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 MCHR1Q99705 422 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 MED18Q9BUE0 208 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 CCDC32Q9BV29 185 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 ASPNQ9BXN1 380 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 FAM117AQ9C073 453 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 ZNF350Q9GZX5 532 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 NUAK2Q9H093 628 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 EQTNQ9NQ60 294 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 CLEC2DQ9UHP7 191 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 GPR55Q9Y2T6 319 aaPredicted RBP9.14□□□□□ -0.95
PTPRD-207ENST00000463477 WDR45Q9Y484 360 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 IQCMA0A1B0GVH7 501 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 HCRTR1O43613 425 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 SRPX2O60687 465 aaPredicted RBP9.13□□□□□ -0.95
PTPRD-207ENST00000463477 IL1AP01583 271 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 DBIP07108 87 aaKnown RBP9.13□□□□□ -0.95
PTPRD-207ENST00000463477 KLK3P07288 261 aaPredicted RBP9.13□□□□□ -0.95
PTPRD-207ENST00000463477 LIFP15018 202 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 MYL12AP19105 171 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 TRHRP34981 398 aaPredicted RBP9.13□□□□□ -0.95
PTPRD-207ENST00000463477 PTGER1P34995 402 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 SOX18P35713 384 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 WNT4P56705 351 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 ACSM1Q08AH1 577 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 SRSF6Q13247 344 aaKnown RBP9.13□□□□□ -0.95
PTPRD-207ENST00000463477 DEFB134Q4QY38 66 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 CRTC2Q53ET0 693 aaPredicted RBP9.13□□□□□ -0.95
PTPRD-207ENST00000463477 SOWAHCQ53LP3 525 aaPredicted RBP9.13□□□□□ -0.95
PTPRD-207ENST00000463477 SPANXN2Q5MJ10 180 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 ZNF836Q6ZNA1 936 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 PLEKHM3Q6ZWE6 761 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 PRICKLE2Q7Z3G6 844 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 GDF7Q7Z4P5 450 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 VASH2Q86V25 355 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 MCATQ8IVS2 390 aaKnown RBP9.13□□□□□ -0.95
PTPRD-207ENST00000463477 GPR135Q8IZ08 494 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 ZNF619Q8N2I2 560 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 PARP16Q8N5Y8 322 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 CDRT4Q8N9R6 151 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 POGLUT1Q8NBL1 392 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 OR8D4Q8NGM9 314 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 CDS1Q92903 461 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 RERGQ96A58 199 aaPredicted RBP9.13□□□□□ -0.95
PTPRD-207ENST00000463477 KIAA1143Q96AT1 154 aaPredicted RBP9.13□□□□□ -0.95
PTPRD-207ENST00000463477 ZG16BQ96DA0 208 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 SLC41A3Q96GZ6 507 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 COQ7Q99807 217 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 PLA2G12AQ9BZM1 189 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 QRSL1Q9H0R6 528 aaKnown RBP9.13□□□□□ -0.95
PTPRD-207ENST00000463477 RNF167Q9H6Y7 350 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 EGLN3Q9H6Z9 239 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 WDR70Q9NW82 654 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 CHCHD3Q9NX63 227 aaKnown RBP9.13□□□□□ -0.95
PTPRD-207ENST00000463477 SSR3Q9UNL2 185 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 CDH10Q9Y6N8 788 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 CACNA1GO43497 2377 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 CPSF4LA6NMK7 179 aaKnown RBP9.13□□□□□ -0.95
PTPRD-207ENST00000463477 C21orf140B9A014 251 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 H0YGG7 62 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 MEN1O00255 615 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 TERTO14746 1132 aaKnown RBP9.13□□□□□ -0.95
PTPRD-207ENST00000463477 ZNF749O43361 778 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 FCMRO60667 390 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 STX11O75558 287 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 OR2B3O76000 313 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 GPR75O95800 540 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 HMGN1P05114 100 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 WT1P19544 449 aaPredicted RBP9.13□□□□□ -0.95
PTPRD-207ENST00000463477 TCN2P20062 427 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 RORAP35398 523 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 MTNR1AP48039 350 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 RORCP51449 518 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 ZNF136P52737 540 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 ARF3P61204 181 aaPredicted RBP9.13□□□□□ -0.95
PTPRD-207ENST00000463477 DUSP5Q16690 384 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 PRAMEF17Q5VTA0 474 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 AADACL4Q5VUY2 407 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 ZNF620Q6ZNG0 422 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 RANBP3LQ86VV4 465 aaPredicted RBP9.13□□□□□ -0.95
PTPRD-207ENST00000463477 SLC22A16Q86VW1 577 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 CLIP4Q8N3C7 705 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 ZNF485Q8NCK3 441 aa9.13□□□□□ -0.95
PTPRD-207ENST00000463477 ANKK1Q8NFD2 765 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms