RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 EFCAB7A8K855 629 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 MYL12BO14950 172 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 NR0B1P51843 470 aaKnown RBP11.75□□□□□ -0.53
VAPB-203ENST00000463370 SKP2Q13309 424 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 SQSTM1Q13501 440 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 GXYLT1Q4G148 440 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 C3orf38Q5JPI3 329 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 RNLSQ5VYX0 342 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 CMIPQ8IY22 773 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 CYP4Z2PQ8N1L4 340 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 LNX2Q8N448 690 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 FAM181AQ8N9Y4 354 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 OR4D9Q8NGE8 314 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 PHOSPHO1Q8TCT1 267 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 NACC2Q96BF6 587 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 C3orf49Q96BT1 292 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 HSPBAP1Q96EW2 488 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 IFT27Q9BW83 186 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 PRRG3Q9BZD7 231 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 SLC7A5P2Q9GIP4 190 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 FGF20Q9NP95 211 aaPredicted RBP11.75□□□□□ -0.53
VAPB-203ENST00000463370 MKKSQ9NPJ1 570 aaPredicted RBP11.75□□□□□ -0.53
VAPB-203ENST00000463370 PI4KAP42356 2102 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 PNMA8CA0A1B0GUJ8 204 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 DYRK3O43781 588 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 ANKRD34CP0C6C1 535 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 LIMS3P0CW19 117 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 LIMS4P0CW20 117 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 BMP7P18075 431 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 CCR4P51679 360 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 FOXK2Q01167 660 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 DGUOKQ16854 277 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 ZNF829Q3KNS6 432 aaPredicted RBP11.75□□□□□ -0.53
VAPB-203ENST00000463370 KLHL22Q53GT1 634 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 ZNF362Q5T0B9 420 aaPredicted RBP11.75□□□□□ -0.53
VAPB-203ENST00000463370 LIPKQ5VXJ0 399 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 PEAR1Q5VY43 1037 aaPredicted RBP11.75□□□□□ -0.53
VAPB-203ENST00000463370 LCN10Q6JVE6 187 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 C16orf47Q6ZP98 133 aaPredicted RBP11.75□□□□□ -0.53
VAPB-203ENST00000463370 CXXC5Q7LFL8 322 aaKnown RBP11.75□□□□□ -0.53
VAPB-203ENST00000463370 ADCK1Q86TW2 530 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 OAFQ86UD1 273 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 LHFPL3Q86UP9 236 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 CDK20Q8IZL9 346 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 SIRT6Q8N6T7 355 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 TMEM105Q8N8V8 129 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 OR52L1Q8NGH7 329 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 GATAD2BQ8WXI9 593 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 SH3GL3Q99963 347 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 ZNF649Q9BS31 505 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 WWTR1Q9GZV5 400 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 MED17Q9NVC6 651 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 RPS6KB2Q9UBS0 482 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 FBXL4Q9UKA2 621 aa11.75□□□□□ -0.53
VAPB-203ENST00000463370 TNRC6BQ9UPQ9 1833 aaKnown RBP11.74□□□□□ -0.53
VAPB-203ENST00000463370 IGKV1D-42A0A075B6H8 117 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 TTC36A6NLP5 189 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 SCRG1O75711 98 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 WISP1O95388 367 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 PPP1R3DO95685 299 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 CLUP10909 449 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 NOS3P29474 1203 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 RBM34P42696 430 aaKnown RBP11.74□□□□□ -0.53
VAPB-203ENST00000463370 SLC9A3P48764 834 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 FAM69BQ5VUD6 431 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 NXNL2Q5VZ03 156 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 IGFN1Q86VF2 1251 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 OR1N1Q8NGS0 311 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 IFI44Q8TCB0 444 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 SLC35B4Q969S0 331 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 CTRCQ99895 268 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 AKIRIN1Q9H9L7 192 aaPredicted RBP11.74□□□□□ -0.53
VAPB-203ENST00000463370 OCIAD1Q9NX40 245 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 TMEM5Q9Y2B1 443 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 SLC35A3Q9Y2D2 325 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 FREM2Q5SZK8 3169 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 A0A087WUJ7 227 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 SCDO00767 359 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 REM1O75628 298 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 RCBTB2O95199 551 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 LALBAP00709 142 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 HMGN1P05114 100 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 UBL4AP11441 157 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 HPGDP15428 266 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 HTR1FP30939 366 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 GPR143P51810 404 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 ACY1Q03154 408 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 NKAIN1Q4KMZ8 207 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 TRIM61Q5EBN2 209 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 PRPF38BQ5VTL8 546 aaKnown RBP11.74□□□□□ -0.53
VAPB-203ENST00000463370 YOD1Q5VVQ6 348 aaPredicted RBP11.74□□□□□ -0.53
VAPB-203ENST00000463370 CYB561A3Q8NBI2 242 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 OR14A16Q8NHC5 309 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 DAZLQ92904 295 aaKnown RBP11.74□□□□□ -0.53
VAPB-203ENST00000463370 PTP4A1Q93096 173 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 VMP1Q96GC9 406 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 TEX12Q9BXU0 123 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 EVA1AQ9H8M9 152 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 AKIP1Q9NQ31 210 aa11.74□□□□□ -0.53
VAPB-203ENST00000463370 SRPK3Q9UPE1 567 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms