RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 APOBEC1P41238 236 aaKnown RBP11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 SGCBQ16585 318 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 HBMQ6B0K9 141 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 HIST2H2BCQ6DN03 193 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 C3orf33Q6P1S2 294 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 MEX3BQ6ZN04 569 aaKnown RBP11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 OLIG3Q7RTU3 272 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 DHDDSQ86SQ9 333 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 LILRA2Q8N149 483 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 OR10D3Q8NH80 312 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 SMPDL3BQ92485 455 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 C14orf79Q96F83 325 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 TMEM19Q96HH6 336 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 CPPED1Q9BRF8 314 aaPredicted RBP11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 SPATA9Q9BWV2 254 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 UCK2Q9BZX2 261 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 GP6Q9HCN6 339 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 DNAJB12Q9NXW2 375 aaKnown RBP11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 HEATR5AQ86XA9 2040 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 COL12A1Q99715 3063 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 KIAA1549Q9HCM3 1950 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 A0A1W2PNV4 684 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 SHISA8B8ZZ34 492 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 C5orf58C9J3I9 102 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 CYP7B1O75881 506 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 BMP5P22003 454 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 SSTR2P30874 369 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 CLK1P49759 484 aaKnown RBP11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 SESN3P58005 492 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 RUNDC3AQ59EK9 446 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 GTF2IRD2BQ6EKJ0 949 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 GRINAQ7Z429 371 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 GTF2IRD2Q86UP8 949 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 KIF18BQ86Y91 864 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 SLC30A8Q8IWU4 369 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 DMRTC2Q8IXT2 367 aaPredicted RBP11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 ZNF454Q8N9F8 522 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 OR52P1PQ8NH57 321 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 CPNE4Q96A23 557 aaPredicted RBP11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 ZG16BQ96DA0 208 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 KLHDC3Q9BQ90 382 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 TACO1Q9BSH4 297 aaKnown RBP11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 SPATA5L1Q9BVQ7 753 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 PACSIN3Q9UKS6 424 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 MED12LQ86YW9 2145 aa11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 CDHR4A6H8M9 788 aa11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 TGM6O95932 706 aa11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 EIF1AXP47813 144 aaKnown RBP11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 SORDQ00796 357 aa11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 RBBP4Q09028 425 aa11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 PON3Q15166 354 aa11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 GUSBP1Q15486 140 aa11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 TOMM34Q15785 309 aaPredicted RBP11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 REEP3Q6NUK4 255 aa11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 PLEKHM3Q6ZWE6 761 aa11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 ZNF550Q7Z398 422 aa11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 GDF7Q7Z4P5 450 aa11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 KRT73Q86Y46 540 aa11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 BHLHE22Q8NFJ8 381 aaPredicted RBP11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 FIG4Q92562 907 aa11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 CGREF1Q99674 301 aa11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 NPAS1Q99742 590 aa11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 SAR1AQ9NR31 198 aa11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 KCNN3Q9UGI6 736 aa11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 ZNF443Q9Y2A4 671 aaPredicted RBP11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 INTS1Q8N201 2190 aaKnown RBP11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 UNC79Q9P2D8 2635 aa11.73□□□□□ -0.53
R3HDM1-213ENST00000463230 A0A0J9YW62 118 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 CFAP73A6NFT4 308 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 MSTNO14793 375 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 CARD18P57730 90 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 EPS8Q12929 822 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 KLF10Q13118 480 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 NFYCQ13952 458 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 MRPL2Q5T653 305 aaKnown RBP11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 ZNF563Q8TA94 476 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 C10orf82Q8WW14 230 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 CNOT9Q92600 299 aaKnown RBP11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 INTS12Q96CB8 462 aaKnown RBP11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 GMPPAQ96IJ6 420 aaPredicted RBP11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 ANKRD27Q96NW4 1050 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 SH3GL1Q99961 368 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 PRRG4Q9BZD6 226 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 QRSL1Q9H0R6 528 aaKnown RBP11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 SLAMF8Q9P0V8 285 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 TNFSF11O14788 317 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 DNPH1O43598 174 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 EFNA2O43921 213 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 TNFSF13O75888 250 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 PGM3O95394 542 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 RNF144AP50876 292 aaPredicted RBP11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 CDK6Q00534 326 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 PLAURQ03405 335 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 MERTKQ12866 999 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 CYLC2Q14093 348 aaPredicted RBP11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 TRMT5Q32P41 509 aaKnown RBP11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 ZNF836Q6ZNA1 936 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 NET1Q7Z628 596 aaPredicted RBP11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 FNDC9Q8TBE3 224 aa11.72□□□□□ -0.53
R3HDM1-213ENST00000463230 OSTF1Q92882 214 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms