RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 LANCL3Q6ZV70 420 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 MRGPREQ86SM8 312 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 CADM2Q8N3J6 435 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 BMPERQ8N8U9 685 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 AGBL5Q8NDL9 886 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 OR4Q3Q8NH05 313 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 DAZLQ92904 295 aaKnown RBP13.31□□□□□ -0.28
HDAC6-213ENST00000462730 LGALS12Q96DT0 336 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 LCORQ96JN0 433 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-213ENST00000462730 LRR1Q96L50 414 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 SLC38A2Q96QD8 506 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 PRRG3Q9BZD7 231 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 C20orf141Q9NUB4 165 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 TAS2R16Q9NYV7 291 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.31□□□□□ -0.28
HDAC6-213ENST00000462730 RPL36Q9Y3U8 105 aaKnown RBP13.31□□□□□ -0.28
HDAC6-213ENST00000462730 PTHP01270 115 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 ZNF806P0C7X5 589 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 ADORA3P0DMS8 318 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 DBTP11182 482 aaKnown RBP13.31□□□□□ -0.28
HDAC6-213ENST00000462730 FGF5P12034 268 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 CD59P13987 128 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 TGFBR2P37173 567 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 PRKCDQ05655 676 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 SYT14P1Q58G82 188 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 MEDAGQ5VYS4 303 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 ZNF385CQ66K41 422 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-213ENST00000462730 SLC30A6Q6NXT4 461 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 C9orf40Q8IXQ3 194 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 CACTIN-AS1Q8N1I8 211 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 GATSQ8NAP1 163 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 PLPP5Q8NEB5 264 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 C9orf43Q8TAL5 461 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-213ENST00000462730 TMEM163Q8TC26 289 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 FANK1Q8TC84 345 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 STT3BQ8TCJ2 826 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 RPL3LQ92901 407 aaKnown RBP13.31□□□□□ -0.28
HDAC6-213ENST00000462730 ADIPOR1Q96A54 375 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 SAMD8Q96LT4 415 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 ZNF582Q96NG8 517 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-213ENST00000462730 EDEM2Q9BV94 578 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 TGIF2Q9GZN2 237 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 ATP13A2Q9NQ11 1180 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 RPS6KB2Q9UBS0 482 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 COPS7AQ9UBW8 275 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 OSGIN1Q9UJX0 560 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 TMEM5Q9Y2B1 443 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 MED31Q9Y3C7 131 aa13.31□□□□□ -0.28
HDAC6-213ENST00000462730 IGLV3-12A0A075B6K2 115 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 C2orf92A0A1B0GVN3 265 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 UTS2O95399 124 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 HBQ1P09105 142 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 ZGLP1P0C6A0 271 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 CD36P16671 472 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 FUT1P19526 365 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 DCDP81605 110 aaKnown RBP13.3□□□□□ -0.28
HDAC6-213ENST00000462730 EFNB1P98172 346 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 IL11RAQ14626 422 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 EBPQ15125 230 aaKnown RBP13.3□□□□□ -0.28
HDAC6-213ENST00000462730 TIGD6Q17RP2 521 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 PGGHGQ32M88 737 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 KLHL26Q53HC5 615 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 SLC25A30Q5SVS4 291 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 HLA-DQA1Q5Y7H0 255 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 KIRREL2Q6UWL6 708 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 NAXDQ8IW45 347 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 PRR22Q8IZ63 422 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 CLDN22Q8N7P3 220 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 WDR36Q8NI36 951 aaKnown RBP13.3□□□□□ -0.28
HDAC6-213ENST00000462730 FGF11Q92914 225 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 HS6ST2Q96MM7 605 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 CDCA4Q9BXL8 241 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 TEX12Q9BXU0 123 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 NRSN2Q9GZP1 204 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 HOXD1Q9GZZ0 328 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 MOV10Q9HCE1 1003 aaKnown RBP13.3□□□□□ -0.28
HDAC6-213ENST00000462730 IL20Q9NYY1 176 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 IL20RAQ9UHF4 553 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 SLC35A3Q9Y2D2 325 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 GPR52Q9Y2T5 361 aa13.3□□□□□ -0.28
HDAC6-213ENST00000462730 SYNDIG1LA6NDD5 238 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 M0R082 166 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 CH25HO95992 272 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 TGFBR1P36897 503 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 NUBP1P53384 320 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 DCAF7P61962 342 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 ALG10BQ5I7T1 473 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 HSDL2Q6YN16 418 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 ZNF367Q7RTV3 350 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 CDK20Q8IZL9 346 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 CYP4Z2PQ8N1L4 340 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 LSMEM1Q8N8F7 131 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 ZNF527Q8NB42 609 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 SUMF1Q8NBK3 374 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 HPS1Q92902 700 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 BPIFA2Q96DR5 249 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 ZHX1-C8orf76Q96EF9 292 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 CRELD1Q96HD1 420 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 UBQLN4Q9NRR5 601 aa13.29□□□□□ -0.28
HDAC6-213ENST00000462730 MRTO4Q9UKD2 239 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms