RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 FOXO1Q12778 655 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 QPRTQ15274 297 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.71□□□□□ -0.86
RTF1-202ENST00000462276 ALG10BQ5I7T1 473 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 DCST1Q5T197 706 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 RPUSD3Q6P087 351 aaKnown RBP9.71□□□□□ -0.86
RTF1-202ENST00000462276 SHQ1Q6PI26 577 aaKnown RBP9.71□□□□□ -0.86
RTF1-202ENST00000462276 Q6ZS92 163 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 RRM2BQ7LG56 351 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 SLC22A16Q86VW1 577 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 SULF2Q8IWU5 870 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 CADM2Q8N3J6 435 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 CATSPER1Q8NEC5 780 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 OR5K1Q8NHB7 308 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 ACOT11Q8WXI4 607 aaPredicted RBP9.71□□□□□ -0.86
RTF1-202ENST00000462276 LRTOMTQ8WZ04 291 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 SLC41A3Q96GZ6 507 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 PKP2Q99959 881 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 WFDC6Q9BQY6 131 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 ARHGAP9Q9BRR9 750 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 VCX3BQ9H321 246 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 DSN1Q9H410 356 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 PRORYQ9H606 182 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 KRCC1Q9NPI7 259 aaPredicted RBP9.71□□□□□ -0.86
RTF1-202ENST00000462276 SERINC1Q9NRX5 453 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 MED17Q9NVC6 651 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 MED11Q9P086 117 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 C15orf41Q9Y2V0 281 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 LYVE1Q9Y5Y7 322 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 FAM208BQ5VWN6 2430 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 ATRXP46100 2492 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 A0A087WUJ7 227 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 CPSF4LA6NMK7 179 aaKnown RBP9.7□□□□□ -0.86
RTF1-202ENST00000462276 G3V2T6 193 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 H0Y3Z8 333 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 ACOT7O00154 380 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 CASQ2O14958 399 aaPredicted RBP9.7□□□□□ -0.86
RTF1-202ENST00000462276 OIP5O43482 229 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 ADAM11O75078 769 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 NTN1O95631 604 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 MT-ND1P03886 318 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 ZNF17P17021 662 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 DPP4P27487 766 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 HTR2AP28223 471 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 ELK4P28324 431 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 GCKP35557 465 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 YAP1P46937 504 aaKnown RBP9.7□□□□□ -0.86
RTF1-202ENST00000462276 LIMS1P48059 325 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 DNASE1L1P49184 302 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 CLK1P49759 484 aaKnown RBP9.7□□□□□ -0.86
RTF1-202ENST00000462276 CDH12P55289 794 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 HOXC5Q00444 222 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 KCNAB2Q13303 367 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 ZNF169Q14929 603 aaPredicted RBP9.7□□□□□ -0.86
RTF1-202ENST00000462276 NDUFAF6Q330K2 333 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 OR5M10Q6IEU7 315 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 LINC00114Q6XXX2 140 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 GDF7Q7Z4P5 450 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 GALNTL5Q7Z4T8 443 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 AMIGO2Q86SJ2 522 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 ATG4DQ86TL0 474 aaPredicted RBP9.7□□□□□ -0.86
RTF1-202ENST00000462276 LILRA2Q8N149 483 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 GTPBP8Q8N3Z3 284 aaPredicted RBP9.7□□□□□ -0.86
RTF1-202ENST00000462276 DNAJC9Q8WXX5 260 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 EXTL1Q92935 676 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 ABHD17AQ96GS6 310 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 GNRHR2Q96P88 292 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 ALPK1Q96QP1 1244 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 PSD2Q9BQI7 771 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 PIGQQ9BRB3 760 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 TMEM43Q9BTV4 400 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 C9orf16Q9BUW7 83 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 ZNF426Q9BUY5 554 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 KLHL4Q9C0H6 718 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 VCXQ9H320 206 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 UBQLN3Q9H347 655 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 NTN4Q9HB63 628 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 ACKR4Q9NPB9 350 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 DEPPQ9NTK1 212 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 B3GNT3Q9Y2A9 372 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 TESMINQ9Y4I5 508 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 SPIN1Q9Y657 262 aaPredicted RBP9.7□□□□□ -0.86
RTF1-202ENST00000462276 MED13Q9UHV7 2174 aa9.7□□□□□ -0.86
RTF1-202ENST00000462276 CELSR3Q9NYQ7 3312 aa9.69□□□□□ -0.86
RTF1-202ENST00000462276 C2orf72A6NCS6 295 aa9.69□□□□□ -0.86
RTF1-202ENST00000462276 LRRC3CA6NJW4 275 aa9.69□□□□□ -0.86
RTF1-202ENST00000462276 ELOA3DA6NLF2 546 aaPredicted RBP9.69□□□□□ -0.86
RTF1-202ENST00000462276 J3KTA2 159 aa9.69□□□□□ -0.86
RTF1-202ENST00000462276 GNB5O14775 395 aa9.69□□□□□ -0.86
RTF1-202ENST00000462276 ZNF208O43345 1280 aa9.69□□□□□ -0.86
RTF1-202ENST00000462276 GLSO94925 669 aaPredicted RBP9.69□□□□□ -0.86
RTF1-202ENST00000462276 DIRAS1O95057 198 aa9.69□□□□□ -0.86
RTF1-202ENST00000462276 F10P00742 488 aa9.69□□□□□ -0.86
RTF1-202ENST00000462276 ANXA8P13928 327 aa9.69□□□□□ -0.86
RTF1-202ENST00000462276 PRKCAP17252 672 aa9.69□□□□□ -0.86
RTF1-202ENST00000462276 CXCR1P25024 350 aa9.69□□□□□ -0.86
RTF1-202ENST00000462276 TACR3P29371 465 aa9.69□□□□□ -0.86
RTF1-202ENST00000462276 RNF144AP50876 292 aaPredicted RBP9.69□□□□□ -0.86
RTF1-202ENST00000462276 MICAQ29983 383 aa9.69□□□□□ -0.86
RTF1-202ENST00000462276 PLPPR5Q32ZL2 321 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms