RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 MERTKQ12866 999 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 CYLC2Q14093 348 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 PON3Q15166 354 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 CYP51A1Q16850 503 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 ZSWIM7Q19AV6 140 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 ZNF311Q5JNZ3 666 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 EEF1A1P5Q5VTE0 462 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 REP15Q6BDI9 236 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 REEP3Q6NUK4 255 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 POMZP3Q6PJE2 187 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 ZNF836Q6ZNA1 936 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 PLEKHM3Q6ZWE6 761 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 SPATA21Q7Z572 469 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 CPLX4Q7Z7G2 160 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 ZNF440Q8IYI8 595 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 GCNT2Q8N0V5 402 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 OR10D3Q8NH80 312 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 FIG4Q92562 907 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 ZNF845Q96IR2 970 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 ANKRD27Q96NW4 1050 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 SFXN3Q9BWM7 321 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 FAM107BQ9H098 131 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 IKZF5Q9H5V7 419 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 BCL2L10Q9HD36 194 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 TIGARQ9NQ88 270 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 DNAJB12Q9NXW2 375 aaKnown RBP9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 MCTS1Q9ULC4 181 aaKnown RBP9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 ZNF175Q9Y473 711 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 SPIN1Q9Y657 262 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 GMEB1Q9Y692 573 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 DSPPQ9NZW4 1301 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 SPTAN1Q13813 2472 aaKnown RBP9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 ASH1LQ9NR48 2969 aaKnown RBP9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 A0A0J9YW62 118 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 LOC100653049A0A140TA62 436 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 GMNCA6NCL1 334 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 CFAP73A6NFT4 308 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 EEF1E1-BLOC1S5C9J1V9 151 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 FBP2O00757 339 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 AP3D1O14617 1153 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 MRASO14807 208 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 ADAMDEC1O15204 470 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 SLC22A2O15244 555 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 EEF1E1O43324 174 aaKnown RBP9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 KRT34O76011 436 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 PGM3O95394 542 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 NTN1O95631 604 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 PABPC4LP0CB38 370 aaKnown RBP9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 ETS2P15036 469 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 SLC7A1P30825 629 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 LSP1P33241 339 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 APOBEC1P41238 236 aaKnown RBP9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 ASCL1P50553 236 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 SEC24CP53992 1094 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 GYS2P54840 703 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 CARD18P57730 90 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 MTPNP58546 118 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 FOXF2Q12947 444 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 SCARB2Q14108 478 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 CAPRIN1Q14444 709 aaKnown RBP9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 CTU2Q2VPK5 515 aaKnown RBP9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 TRMT5Q32P41 509 aaKnown RBP9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 TMEM176BQ3YBM2 270 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 COQ5Q5HYK3 327 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 RNF220Q5VTB9 566 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 C3orf33Q6P1S2 294 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 MEX3BQ6ZN04 569 aaKnown RBP9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 ZNF550Q7Z398 422 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 GRINAQ7Z429 371 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 SNX32Q86XE0 403 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 KRT73Q86Y46 540 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 CNEP1R1Q8N9A8 125 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 PCYOX1LQ8NBM8 494 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 RELL2Q8NC24 303 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 FNDC9Q8TBE3 224 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 OSTF1Q92882 214 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 MARVELD3Q96A59 401 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 REXO5Q96IC2 774 aaKnown RBP9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 ADGRG7Q96K78 797 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 SPATA5L1Q9BVQ7 753 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 SPATA9Q9BWV2 254 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 TMEM38AQ9H6F2 299 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 GID8Q9NWU2 228 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 ARMCX1Q9P291 453 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 ANGPT4Q9Y264 503 aa9.51□□□□□ -0.89
TRAPPC12-213ENST00000461577 NBPF19A0A087WUL8 3843 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 INTS1Q8N201 2190 aaKnown RBP9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 HECTD1Q9ULT8 2610 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 CDHR4A6H8M9 788 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 ETV2O00321 342 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 EFNA2O43921 213 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 PLGP00747 810 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 CRHP06850 196 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 GKN3PP0CG01 181 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 TFPIP10646 304 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 SHC1P29353 583 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 UQCRC1P31930 480 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 HTR3AP46098 478 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 COPZ1P61923 177 aa9.5□□□□□ -0.89
TRAPPC12-213ENST00000461577 SIRPAP78324 504 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms