RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 NOL3O60936 208 aaKnown RBP9.62□□□□□ -0.87
HERC4-207ENST00000460168 GCM2O75603 506 aaPredicted RBP9.62□□□□□ -0.87
HERC4-207ENST00000460168 TGM6O95932 706 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 ATP1B1P05026 303 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 FABP3P05413 133 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 NR2F1P10589 423 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 ZNF26P17031 533 aaPredicted RBP9.62□□□□□ -0.87
HERC4-207ENST00000460168 NT5EP21589 574 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 SLC1A3P43003 542 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 CRYBA2P53672 197 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 ITGA1P56199 1179 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 SELENOWP63302 87 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 HSF2Q03933 536 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 STX4Q12846 297 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 RPS26P11Q5JNZ5 115 aaPredicted RBP9.62□□□□□ -0.87
HERC4-207ENST00000460168 ZC3H14Q6PJT7 736 aaKnown RBP9.62□□□□□ -0.87
HERC4-207ENST00000460168 BTLAQ7Z6A9 289 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 NOXA1Q86UR1 476 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 CHERPQ8IWX8 916 aaKnown RBP9.62□□□□□ -0.87
HERC4-207ENST00000460168 UBE2J2Q8N2K1 259 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 CBR4Q8N4T8 237 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 RCBTB1Q8NDN9 531 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 OR1L3Q8NH93 324 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 ST6GAL2Q96JF0 529 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 NDC1Q9BTX1 674 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 DOHHQ9BU89 302 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 LRRN3Q9H3W5 708 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 IL1RAPQ9NPH3 570 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 DHCR7Q9UBM7 475 aaKnown RBP9.62□□□□□ -0.87
HERC4-207ENST00000460168 DNAJB9Q9UBS3 223 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 KCNK7Q9Y2U2 307 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 R4GN57 208 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 LDLRAD4O15165 306 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 OR10H2O60403 315 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 PTTG1O95997 202 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 CKMT1AP12532 417 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 MAGEA2P43356 314 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 XCR1P46094 333 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 DUSP3P51452 185 aaPredicted RBP9.62□□□□□ -0.87
HERC4-207ENST00000460168 TMBIM6P55061 237 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 PCBP3P57721 371 aaKnown RBP9.62□□□□□ -0.87
HERC4-207ENST00000460168 SQSTM1Q13501 440 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 EFR3AQ14156 821 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 SYPL1Q16563 259 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 KLHL26Q53HC5 615 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 CRB2Q5IJ48 1285 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 PRAMEF17Q5VTA0 474 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 FAM111BQ6SJ93 734 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 FAM122BQ7Z309 247 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 ZNF595Q8IYB9 648 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 ZNF248Q8NDW4 579 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 OR4D9Q8NGE8 314 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 OR51Q1Q8NH59 317 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 SPPL2AQ8TCT8 520 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 TMBIM1Q969X1 311 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 C16orf58Q96GQ5 468 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 SGCZQ96LD1 299 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 MS4A4EQ96PG1 132 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 SHARPINQ9H0F6 387 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 PTGFRNQ9P2B2 879 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 TMEM184BQ9Y519 407 aaPredicted RBP9.62□□□□□ -0.87
HERC4-207ENST00000460168 TRBV23-1A0A0A0MS06 115 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 BLACEA4D250 179 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 FAM86C2PA6NEL3 165 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 H3BMH7 237 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 ARHGEF9O43307 516 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 NME6O75414 186 aaPredicted RBP9.61□□□□□ -0.87
HERC4-207ENST00000460168 PDE9AO76083 593 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 ZNF182P17025 639 aaPredicted RBP9.61□□□□□ -0.87
HERC4-207ENST00000460168 LAP3P28838 519 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 CRISP3P54108 245 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 PSPHP78330 225 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 VLDLRP98155 873 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 DSG2Q14126 1118 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 TRMT12Q53H54 448 aaKnown RBP9.61□□□□□ -0.87
HERC4-207ENST00000460168 OTUD3Q5T2D3 398 aaPredicted RBP9.61□□□□□ -0.87
HERC4-207ENST00000460168 IGF2-ASQ6U949 168 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 OR2L13Q8N349 312 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 RNASE11Q8TAA1 199 aaKnown RBP9.61□□□□□ -0.87
HERC4-207ENST00000460168 DOK4Q8TEW6 326 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 ANKRD9Q96BM1 317 aaPredicted RBP9.61□□□□□ -0.87
HERC4-207ENST00000460168 MVB12AQ96EY5 273 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 LOXL4Q96JB6 756 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 OR5M11Q96RB7 305 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 CCNL2Q96S94 520 aaPredicted RBP9.61□□□□□ -0.87
HERC4-207ENST00000460168 ZNF607Q96SK3 696 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 TREX2Q9BQ50 279 aaPredicted RBP9.61□□□□□ -0.87
HERC4-207ENST00000460168 ACTRT3Q9BYD9 372 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 OR51B6Q9H340 312 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 GPN2Q9H9Y4 310 aaPredicted RBP9.61□□□□□ -0.87
HERC4-207ENST00000460168 PRTFDC1Q9NRG1 225 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 PNPLA3Q9NST1 481 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 ABCG2Q9UNQ0 655 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 ZNF451Q9Y4E5 1061 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 PCDHGA5Q9Y5G8 931 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 U3KQV3 271 aa9.61□□□□□ -0.87
HERC4-207ENST00000460168 A0A0U1RQV5 110 aa9.6□□□□□ -0.87
HERC4-207ENST00000460168 EI24O14681 340 aa9.6□□□□□ -0.87
HERC4-207ENST00000460168 RGS5O15539 181 aa9.6□□□□□ -0.87
HERC4-207ENST00000460168 ZNF749O43361 778 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms