RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 BTBD9Q96Q07 612 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 ADOQ96SZ5 270 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 GPR87Q9BY21 358 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 GPR61Q9BZJ8 451 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 SEMA4CQ9C0C4 833 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 DUSP22Q9NRW4 184 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 C19orf25Q9UFG5 118 aaPredicted RBP9.49□□□□□ -0.89
USP39-210ENST00000459775 CBLCQ9ULV8 474 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 ANGPT4Q9Y264 503 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 CHST2Q9Y4C5 530 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 ITPR1Q14643 2758 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 DHRS12A0PJE2 317 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 DUXAA6NLW8 204 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 C21orf140B9A014 251 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 hCG_2039718K7EN88 272 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 ASNA1O43681 348 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 TLX3O43711 291 aaPredicted RBP9.48□□□□□ -0.89
USP39-210ENST00000459775 OR2J2O76002 312 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 DXOO77932 396 aaKnown RBP9.48□□□□□ -0.89
USP39-210ENST00000459775 MFN2O95140 757 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 F10P00742 488 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 ALPPP05187 535 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 C8BP07358 591 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 TAGLN2P37802 199 aaKnown RBP9.48□□□□□ -0.89
USP39-210ENST00000459775 PPICP45877 212 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 KCNJ5P48544 419 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 GBX2P52951 348 aaPredicted RBP9.48□□□□□ -0.89
USP39-210ENST00000459775 CRISP3P54108 245 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 UCNP55089 124 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 HOXC5Q00444 222 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 RBBP4Q09028 425 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 CLN3Q13286 438 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 ZNHIT3Q15649 155 aaPredicted RBP9.48□□□□□ -0.89
USP39-210ENST00000459775 NDUFAF6Q330K2 333 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 SLC25A24Q6NUK1 477 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 IDO2Q6ZQW0 420 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 NDUFAF7Q7L592 441 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 SLC29A4Q7RTT9 530 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 LACC1Q8IV20 430 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 CLIP4Q8N3C7 705 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 SIRT6Q8N6T7 355 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 GATSQ8NAP1 163 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 SLC24A4Q8NFF2 622 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 OR4D11Q8NGI4 311 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 ANAPC16Q96DE5 110 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 LCORQ96JN0 433 aaPredicted RBP9.48□□□□□ -0.89
USP39-210ENST00000459775 HSH2DQ96JZ2 352 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 ZNF578Q96N58 590 aaPredicted RBP9.48□□□□□ -0.89
USP39-210ENST00000459775 TRNT1Q96Q11 434 aaKnown RBP9.48□□□□□ -0.89
USP39-210ENST00000459775 STACQ99469 402 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 MRPL37Q9BZE1 423 aaKnown RBP9.48□□□□□ -0.89
USP39-210ENST00000459775 RTN4RQ9BZR6 473 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 ZBTB20Q9HC78 741 aaPredicted RBP9.48□□□□□ -0.89
USP39-210ENST00000459775 S100A14Q9HCY8 104 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 Q9N2J8 555 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 EXD2Q9NVH0 621 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 GRHPRQ9UBQ7 328 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 PRODH2Q9UF12 536 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 LRCH1Q9Y2L9 728 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 WDR45Q9Y484 360 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 MGAQ8IWI9 3026 aa9.48□□□□□ -0.89
USP39-210ENST00000459775 GCN1Q92616 2671 aaKnown RBP9.48□□□□□ -0.89
USP39-210ENST00000459775 EFSO43281 561 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 HNRNPRO43390 633 aaKnown RBP9.47□□□□□ -0.89
USP39-210ENST00000459775 PPM1BO75688 479 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 ATP6V1G2O95670 118 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 PRB1P04280 392 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 LIPCP11150 499 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 EDN3P14138 238 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 PIGAP37287 484 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 HLA-DQA1Q5Y7H0 255 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 ZCCHC12Q6PEW1 402 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 FKBP9P1Q75LS8 142 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 CBLL1Q75N03 491 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 TSEN54Q7Z6J9 526 aaKnown RBP9.47□□□□□ -0.89
USP39-210ENST00000459775 AMIGO2Q86SJ2 522 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 ZNF614Q8N883 585 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 ZNF441Q8N8Z8 693 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 VANGL1Q8TAA9 524 aaPredicted RBP9.47□□□□□ -0.89
USP39-210ENST00000459775 ELP5Q8TE02 316 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 ADAMTS17Q8TE56 1095 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 LRTOMTQ8WZ04 291 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 SPATA9Q9BWV2 254 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 ZNF350Q9GZX5 532 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 SEMA6AQ9H2E6 1030 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 TRIM45Q9H8W5 580 aaPredicted RBP9.47□□□□□ -0.89
USP39-210ENST00000459775 SP140LQ9H930 580 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 TCF7L1Q9HCS4 588 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 PPIEQ9UNP9 301 aaKnown RBP9.47□□□□□ -0.89
USP39-210ENST00000459775 A0A1W2PPW3 197 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 XKRY2A2RUG3 117 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 C2orf72A6NCS6 295 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 AQP12BA6NM10 295 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 GMFGO60234 142 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 STX11O75558 287 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 REM1O75628 298 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 UGT2B17O75795 530 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 CD247P20963 164 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 DRD5P21918 477 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 ABCD3P28288 659 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms