RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 FUZQ9BT04 418 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 GPR87Q9BY21 358 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 MRPS26Q9BYN8 205 aaKnown RBP8.21□□□□□ -1.1
VPS50-207ENST00000458530 DEFB126Q9BYW3 111 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 TBL1XR1Q9BZK7 514 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 ZNF700Q9H0M5 742 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 VCX3AQ9NNX9 186 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 RLIMQ9NVW2 624 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 FBXO34Q9NWN3 711 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 IMPAD1Q9NX62 359 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 DNAJB12Q9NXW2 375 aaKnown RBP8.21□□□□□ -1.1
VPS50-207ENST00000458530 UBAP1Q9NZ09 502 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 SLC7A7Q9UM01 511 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 A0A087WXM4 84 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 CENPVL1A0A0U1RR11 272 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 ZNF264O43296 627 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 WIPF1O43516 503 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 MAN1A2O60476 641 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 EIF4E2O60573 245 aaKnown RBP8.2□□□□□ -1.1
VPS50-207ENST00000458530 TSPAN2O60636 221 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 MITFO75030 526 aaPredicted RBP8.2□□□□□ -1.1
VPS50-207ENST00000458530 CNOT3O75175 753 aaKnown RBP8.2□□□□□ -1.1
VPS50-207ENST00000458530 PPM1BO75688 479 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 ITGB2P05107 769 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 GNAO1P09471 354 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 GP1BBP13224 206 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 CYP4B1P13584 511 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 ETV5P41161 510 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 EFNA3P52797 238 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 GABARAPL2P60520 117 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 CSNK2BP67870 215 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 IL5RAQ01344 420 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 NFATC3Q12968 1075 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 TSPAN31Q12999 210 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 PCOLCEQ15113 449 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 BTBD16Q32M84 506 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 C3orf38Q5JPI3 329 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 PLAG1Q6DJT9 500 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 RPL13AP3Q6NVV1 102 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 C1orf94Q6P1W5 598 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 PGBD2Q6P3X8 592 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 ULK3Q6PHR2 472 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 MBOAT2Q6ZWT7 520 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 NDUFAF7Q7L592 441 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 ZAR1Q86SH2 424 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 RAB43Q86YS6 212 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 NLGN4XQ8N0W4 816 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 LSMEM1Q8N8F7 131 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 FAM71CQ8NEG0 241 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 NLGN4YQ8NFZ3 816 aaPredicted RBP8.2□□□□□ -1.1
VPS50-207ENST00000458530 TEX47Q8TBZ9 253 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 RNF217Q8TC41 542 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 M1APQ8TC57 530 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 CNOT9Q92600 299 aaKnown RBP8.2□□□□□ -1.1
VPS50-207ENST00000458530 GTPBP3Q969Y2 492 aaKnown RBP8.2□□□□□ -1.1
VPS50-207ENST00000458530 MUS81Q96NY9 551 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 IP6K3Q96PC2 410 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 ADOQ96SZ5 270 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 WDR77Q9BQA1 342 aaPredicted RBP8.2□□□□□ -1.1
VPS50-207ENST00000458530 NDEL1Q9GZM8 345 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 LAT2Q9GZY6 243 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 MAN2C1Q9NTJ4 1040 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 TUBA8Q9NY65 449 aaPredicted RBP8.2□□□□□ -1.1
VPS50-207ENST00000458530 KCNE5Q9UJ90 142 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 NDRG4Q9ULP0 352 aaKnown RBP8.2□□□□□ -1.1
VPS50-207ENST00000458530 CHST2Q9Y4C5 530 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 NPFFR2Q9Y5X5 522 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 CREBBPQ92793 2442 aa8.2□□□□□ -1.1
VPS50-207ENST00000458530 ITPR2Q14571 2701 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 MPDZO75970 2070 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 A0A087WUU8 490 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 IGHV1-45A0A0A0MS14 117 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 NSG1A0A0A6YYJ2 146 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 A0A0B4J2E0 115 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 IGHV3-20A0A0C4DH32 117 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 A0A1B0GX12 115 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 CLDN24A6NM45 220 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 C9orf172C9J069 976 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 ALG1L2C9J202 215 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 H3BN98 237 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 STMND1H3BQB6 276 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 NDUFB5O43674 189 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 TPST2O60704 377 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 ICOSLGO75144 302 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 SEMA7AO75326 666 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 KLF7O75840 302 aaPredicted RBP8.19□□□□□ -1.1
VPS50-207ENST00000458530 LINGO3P0C6S8 592 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 CCDC159P0C7I6 412 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 GKN3PP0CG01 181 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 PNMTP11086 282 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 COX6A1P12074 109 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 TCN2P20062 427 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 PGCP20142 388 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 FPR3P25089 353 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 RBMS1P29558 406 aaKnown RBP8.19□□□□□ -1.1
VPS50-207ENST00000458530 EVI2BP34910 448 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 GGT2P36268 569 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 STAT5AP42229 794 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 CRISP1P54107 249 aa8.19□□□□□ -1.1
VPS50-207ENST00000458530 SUMO3P55854 103 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms