RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 MEP1AQ16819 746 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 COL28A1Q2UY09 1125 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 C4orf48Q5BLP8 95 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 TMEM164Q5U3C3 297 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 C1orf94Q6P1W5 598 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 IGF2-ASQ6U949 168 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 IL20RBQ6UXL0 311 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 TREML4Q6UXN2 200 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 SLC46A3Q7Z3Q1 461 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 BCDIN3DQ7Z5W3 292 aaKnown RBP7.95□□□□□ -1.14
RIF1-208ENST00000457745 ATG4DQ86TL0 474 aaPredicted RBP7.95□□□□□ -1.14
RIF1-208ENST00000457745 RPS19BP1Q86WX3 136 aaKnown RBP7.95□□□□□ -1.14
RIF1-208ENST00000457745 TAGAPQ8N103 731 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 DHRSXQ8N5I4 330 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 TMCO5AQ8N6Q1 288 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 LRRC17Q8N6Y2 441 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 WDSUB1Q8N9V3 476 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 OR5M1Q8NGP8 315 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 OR13C2Q8NGS9 318 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 OR4Q3Q8NH05 313 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 CNIH3Q8TBE1 160 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 POC1BQ8TC44 478 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 GPR119Q8TDV5 335 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 DUSP19Q8WTR2 217 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 PMM1Q92871 262 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 FGF11Q92914 225 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 POP5Q969H6 163 aaKnown RBP7.95□□□□□ -1.14
RIF1-208ENST00000457745 THOC3Q96J01 351 aaKnown RBP7.95□□□□□ -1.14
RIF1-208ENST00000457745 OSBPL11Q9BXB4 747 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 GPR87Q9BY21 358 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 DGCR6LQ9BY27 220 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 B3GNT4Q9C0J1 378 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 LAT2Q9GZY6 243 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 VCX3BQ9H321 246 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 GPN2Q9H9Y4 310 aaPredicted RBP7.95□□□□□ -1.14
RIF1-208ENST00000457745 KRT84Q9NSB2 600 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 DEPPQ9NTK1 212 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 KLHL28Q9NXS3 571 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 ZNF226Q9NYT6 803 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 IL20RAQ9UHF4 553 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 SLC13A4Q9UKG4 626 aa7.95□□□□□ -1.14
RIF1-208ENST00000457745 TNRC6AQ8NDV7 1962 aaKnown RBP7.95□□□□□ -1.14
RIF1-208ENST00000457745 SYNDIG1LA6NDD5 238 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 ARRDC5A6NEK1 342 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 ARGFXA6NJG6 315 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 SLC16A6O15403 523 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 HCRTR2O43614 444 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 NDUFB5O43674 189 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 WBP4O75554 376 aaKnown RBP7.94□□□□□ -1.14
RIF1-208ENST00000457745 SMNDC1O75940 238 aaKnown RBP eCLIP7.94□□□□□ -1.14
RIF1-208ENST00000457745 SERPINA7P05543 415 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 LYNP07948 512 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 LIPCP11150 499 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 HOXB6P17509 224 aaKnown RBP7.94□□□□□ -1.14
RIF1-208ENST00000457745 GABRB1P18505 474 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 KLK2P20151 261 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 SHC1P29353 583 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 CASP3P42574 277 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 MLLT10P55197 1068 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 ISL1P61371 349 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 RPP38P78345 283 aaKnown RBP7.94□□□□□ -1.14
RIF1-208ENST00000457745 PIGFQ07326 219 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 NPRL3Q12980 569 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 QPRTQ15274 297 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 DCAF10Q5QP82 559 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 ZNF691Q5VV52 312 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 ACSM5Q6NUN0 579 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 ZNF730Q6ZMV8 503 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 MBOAT2Q6ZWT7 520 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 NUP54Q7Z3B4 507 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 RANBP3LQ86VV4 465 aaPredicted RBP7.94□□□□□ -1.14
RIF1-208ENST00000457745 CCDC103Q8IW40 242 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 WDFY1Q8IWB7 410 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 CMIPQ8IY22 773 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 IL22RA1Q8N6P7 574 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 LSMEM1Q8N8F7 131 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 OR2M3Q8NG83 312 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 OR5L2Q8NGL0 311 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 RNF217Q8TC41 542 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 FBLIM1Q8WUP2 373 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 ACOT11Q8WXI4 607 aaPredicted RBP7.94□□□□□ -1.14
RIF1-208ENST00000457745 HPS1Q92902 700 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 SIGLEC12Q96PQ1 595 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 UBL7Q96S82 380 aaPredicted RBP7.94□□□□□ -1.14
RIF1-208ENST00000457745 ZNF559Q9BR84 538 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 DPH1Q9BZG8 443 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 UCK2Q9BZX2 261 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 HOXD1Q9GZZ0 328 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 EXOSC3Q9NQT5 275 aaKnown RBP7.94□□□□□ -1.14
RIF1-208ENST00000457745 PAPOLBQ9NRJ5 636 aaKnown RBP7.94□□□□□ -1.14
RIF1-208ENST00000457745 PAK1IP1Q9NWT1 392 aaPredicted RBP7.94□□□□□ -1.14
RIF1-208ENST00000457745 PLA2G3Q9NZ20 509 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 KIF17Q9P2E2 1029 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 SEC14L4Q9UDX3 406 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 OSGIN1Q9UJX0 560 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 NDRG4Q9ULP0 352 aaKnown RBP7.94□□□□□ -1.14
RIF1-208ENST00000457745 RNF6Q9Y252 685 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 SLC35A3Q9Y2D2 325 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 CSAG2Q9Y5P2 127 aa7.94□□□□□ -1.14
RIF1-208ENST00000457745 LOC100130705A0A1B0GUX0 176 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms