RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 TOMM34Q15785 309 aaPredicted RBP20.81■□□□□ 0.92
CBX3-204ENST00000456948 TMEM176BQ3YBM2 270 aaPredicted RBP20.81■□□□□ 0.92
CBX3-204ENST00000456948 C3orf33Q6P1S2 294 aa20.81■□□□□ 0.92
CBX3-204ENST00000456948 LURAP1LQ8IV03 231 aa20.81■□□□□ 0.92
CBX3-204ENST00000456948 FAM71CQ8NEG0 241 aa20.81■□□□□ 0.92
CBX3-204ENST00000456948 ATP6V1C2Q8NEY4 427 aa20.81■□□□□ 0.92
CBX3-204ENST00000456948 SLC38A5Q8WUX1 472 aa20.81■□□□□ 0.92
CBX3-204ENST00000456948 AURKBQ96GD4 344 aaPredicted RBP20.81■□□□□ 0.92
CBX3-204ENST00000456948 FANCFQ9NPI8 374 aa20.81■□□□□ 0.92
CBX3-204ENST00000456948 JKAMPQ9P055 326 aa20.81■□□□□ 0.92
CBX3-204ENST00000456948 HEATR5AQ86XA9 2040 aa20.81■□□□□ 0.92
CBX3-204ENST00000456948 KIAA1549Q9HCM3 1950 aa20.81■□□□□ 0.92
CBX3-204ENST00000456948 A0A0J9YW62 118 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 ETV2O00321 342 aaPredicted RBP20.8■□□□□ 0.92
CBX3-204ENST00000456948 CXCL13O43927 109 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 SMNDC1O75940 238 aaKnown RBP eCLIP20.8■□□□□ 0.92
CBX3-204ENST00000456948 C1QCP02747 245 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 BCHEP06276 602 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 TFPTP0C1Z6 253 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 NID1P14543 1247 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 RYKP34925 604 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 ARFIP2P53365 341 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 MVDP53602 400 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 SORDQ00796 357 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 TLE4Q04727 773 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 MERTKQ12866 999 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 GTDC1Q4AE62 458 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 LIN52Q52LA3 116 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 PRAMEF8Q5VWM4 474 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 PRAMEF7Q5VXH5 474 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 PLXDC2Q6UX71 529 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 LUZP2Q86TE4 346 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 OR52P1PQ8NH57 321 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 SLC25A43Q8WUT9 341 aaPredicted RBP20.8■□□□□ 0.92
CBX3-204ENST00000456948 GMPPAQ96IJ6 420 aaPredicted RBP20.8■□□□□ 0.92
CBX3-204ENST00000456948 ADGRG7Q96K78 797 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 SLC39A3Q9BRY0 314 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 QRSL1Q9H0R6 528 aaKnown RBP20.8■□□□□ 0.92
CBX3-204ENST00000456948 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.8■□□□□ 0.92
CBX3-204ENST00000456948 IFT52Q9Y366 437 aa20.8■□□□□ 0.92
CBX3-204ENST00000456948 CENPVL1A0A0U1RR11 272 aa20.79■□□□□ 0.92
CBX3-204ENST00000456948 TUBAL3A6NHL2 446 aa20.79■□□□□ 0.92
CBX3-204ENST00000456948 NTN1O95631 604 aa20.79■□□□□ 0.92
CBX3-204ENST00000456948 CAPN3P20807 821 aa20.79■□□□□ 0.92
CBX3-204ENST00000456948 DLX5P56178 289 aa20.79■□□□□ 0.92
CBX3-204ENST00000456948 FAM214BQ7L5A3 538 aa20.79■□□□□ 0.92
CBX3-204ENST00000456948 GRINAQ7Z429 371 aa20.79■□□□□ 0.92
CBX3-204ENST00000456948 ZNF295-AS1Q8N0V1 137 aa20.79■□□□□ 0.92
CBX3-204ENST00000456948 NPAS1Q99742 590 aa20.79■□□□□ 0.92
CBX3-204ENST00000456948 TMEM120AQ9BXJ8 343 aa20.79■□□□□ 0.92
CBX3-204ENST00000456948 MCCC2Q9HCC0 563 aa20.79■□□□□ 0.92
CBX3-204ENST00000456948 A4GALTQ9NPC4 353 aa20.79■□□□□ 0.92
CBX3-204ENST00000456948 A8MXE2 369 aa20.78■□□□□ 0.92
CBX3-204ENST00000456948 TNFSF13O75888 250 aa20.78■□□□□ 0.92
CBX3-204ENST00000456948 BMP2P12643 396 aa20.78■□□□□ 0.92
CBX3-204ENST00000456948 RPS4Y1P22090 263 aaKnown RBP20.78■□□□□ 0.92
CBX3-204ENST00000456948 COPZ1P61923 177 aa20.78■□□□□ 0.92
CBX3-204ENST00000456948 SIRPAP78324 504 aa20.78■□□□□ 0.92
CBX3-204ENST00000456948 RNPS1Q15287 305 aaKnown RBP20.78■□□□□ 0.92
CBX3-204ENST00000456948 CTU2Q2VPK5 515 aaKnown RBP20.78■□□□□ 0.92
CBX3-204ENST00000456948 GCNT6Q5T4J0 391 aa20.78■□□□□ 0.92
CBX3-204ENST00000456948 BBS10Q8TAM1 723 aa20.78■□□□□ 0.92
CBX3-204ENST00000456948 FAM222BQ8WU58 562 aa20.78■□□□□ 0.92
CBX3-204ENST00000456948 STARD4Q96DR4 205 aa20.78■□□□□ 0.92
CBX3-204ENST00000456948 TMEM19Q96HH6 336 aa20.78■□□□□ 0.92
CBX3-204ENST00000456948 KLHDC3Q9BQ90 382 aa20.78■□□□□ 0.92
CBX3-204ENST00000456948 CCDC134Q9H6E4 229 aa20.78■□□□□ 0.92
CBX3-204ENST00000456948 FGFR1OP2Q9NVK5 253 aa20.78■□□□□ 0.92
CBX3-204ENST00000456948 PROCRQ9UNN8 238 aa20.78■□□□□ 0.92
CBX3-204ENST00000456948 GMEB1Q9Y692 573 aa20.78■□□□□ 0.92
CBX3-204ENST00000456948 CFAP73A6NFT4 308 aa20.77■□□□□ 0.92
CBX3-204ENST00000456948 THBS1P07996 1170 aa20.77■□□□□ 0.92
CBX3-204ENST00000456948 IL11P20809 199 aa20.77■□□□□ 0.92
CBX3-204ENST00000456948 IDH2P48735 452 aaKnown RBP20.77■□□□□ 0.92
CBX3-204ENST00000456948 MAP2K6P52564 334 aa20.77■□□□□ 0.92
CBX3-204ENST00000456948 RAC3P60763 192 aa20.77■□□□□ 0.92
CBX3-204ENST00000456948 CSNK2A1P68400 391 aaPredicted RBP20.77■□□□□ 0.92
CBX3-204ENST00000456948 GUCY1A3Q02108 690 aa20.77■□□□□ 0.92
CBX3-204ENST00000456948 PAGE3Q5JUK9 113 aa20.77■□□□□ 0.92
CBX3-204ENST00000456948 MRPL2Q5T653 305 aaKnown RBP20.77■□□□□ 0.92
CBX3-204ENST00000456948 PLEKHM3Q6ZWE6 761 aa20.77■□□□□ 0.92
CBX3-204ENST00000456948 ZNF550Q7Z398 422 aa20.77■□□□□ 0.92
CBX3-204ENST00000456948 HMGN2P46Q86SG4 172 aa20.77■□□□□ 0.92
CBX3-204ENST00000456948 STK32CQ86UX6 486 aa20.77■□□□□ 0.92
CBX3-204ENST00000456948 KRT73Q86Y46 540 aa20.77■□□□□ 0.92
CBX3-204ENST00000456948 SLC43A2Q8N370 569 aa20.77■□□□□ 0.92
CBX3-204ENST00000456948 CNOT9Q92600 299 aaKnown RBP20.77■□□□□ 0.92
CBX3-204ENST00000456948 SPATA5L1Q9BVQ7 753 aa20.77■□□□□ 0.92
CBX3-204ENST00000456948 BCL2L10Q9HD36 194 aa20.77■□□□□ 0.92
CBX3-204ENST00000456948 SLC52A3Q9NQ40 469 aa20.77■□□□□ 0.92
CBX3-204ENST00000456948 ELOVL5Q9NYP7 299 aa20.77■□□□□ 0.92
CBX3-204ENST00000456948 NDRG3Q9UGV2 375 aa20.77■□□□□ 0.92
CBX3-204ENST00000456948 CREBBPQ92793 2442 aa20.77■□□□□ 0.92
CBX3-204ENST00000456948 EFNA2O43921 213 aa20.76■□□□□ 0.91
CBX3-204ENST00000456948 AQP8O94778 261 aa20.76■□□□□ 0.91
CBX3-204ENST00000456948 CD8BP10966 210 aa20.76■□□□□ 0.91
CBX3-204ENST00000456948 CPOXP36551 454 aa20.76■□□□□ 0.91
CBX3-204ENST00000456948 MDH1P40925 334 aaKnown RBP20.76■□□□□ 0.91
CBX3-204ENST00000456948 KIR2DL2P43627 348 aaPredicted RBP20.76■□□□□ 0.91
CBX3-204ENST00000456948 KCNJ5P48544 419 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms