RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 UBE2IP63279 158 aaKnown RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 FAM189BP81408 668 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 PTPRCAPQ14761 206 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 PPA1Q15181 289 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 RNLSQ5VYX0 342 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 OVCH2Q7RTZ1 564 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 LINC00518Q8N0U6 118 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 CCDC54Q8NEL0 328 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 OR52E2Q8NGJ4 325 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 MSLNLQ96KJ4 702 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 TRMT61BQ9BVS5 477 aaKnown RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 NXF2Q9GZY0 626 aaKnown RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 MTIF3Q9H2K0 278 aaKnown RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 POLMQ9NP87 494 aaPredicted RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 A4GALTQ9NPC4 353 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 ADARB2Q9NS39 739 aaKnown RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 CENPMQ9NSP4 180 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 EVA1BQ9NVM1 165 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 ZNF223Q9UK11 482 aaPredicted RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 DKKL1Q9UK85 242 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 CLEC4EQ9ULY5 219 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 SLC6A14Q9UN76 642 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 USP22Q9UPT9 525 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 TJP1Q07157 1748 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 MTMR11A4FU01 709 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 FOXE1O00358 373 aaPredicted RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 GPR137BO60478 399 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 STBD1O95210 358 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 OR2C1O95371 312 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 IL33O95760 270 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 PFKMP08237 780 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 TNFRSF1BP20333 461 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 ENPP1P22413 925 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 ZNF41P51814 821 aaPredicted RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 F2RL1P55085 397 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 TAS2R46P59540 309 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 CD300CQ08708 224 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 RPE65Q16518 533 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 DECR1Q16698 335 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 ZNF322Q6U7Q0 402 aaPredicted RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 RBMS3Q6XE24 437 aaKnown RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 Q6ZPB1 254 aaPredicted RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 SLC24A5Q71RS6 500 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 BAP18Q8IXM2 172 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 BVESQ8NE79 360 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 OR51A7Q8NH64 312 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 LGALS14Q8TCE9 139 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 ZNF689Q96CS4 500 aaPredicted RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 GPR137Q96N19 417 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 EDEM2Q9BV94 578 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 UBQLN3Q9H347 655 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 FBXL12Q9NXK8 326 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 CPA4Q9UI42 421 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 SH3BGRL2Q9UJC5 107 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 PCDHGA5Q9Y5G8 931 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 RFPL4AA6NLU0 287 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 RFPL4AL1F8VTS6 287 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 H0YIV9 168 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 M0QZK8 103 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 M0R082 166 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 PPP6CO00743 305 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 SCDO00767 359 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 SYT7O43581 403 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 CYTIPO60759 359 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 GGCTO75223 188 aaKnown RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 PAPLNO95428 1278 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 AHSA1O95433 338 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 ADH1CP00326 375 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 SNRPBP14678 240 aaKnown RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 FPR3P25089 353 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 NFYBP25208 207 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 SHC1P29353 583 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 CAV3P56539 151 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 RPS24P62847 133 aaKnown RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 SIRPAP78324 504 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 SRPXP78539 464 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 SLC7A9P82251 487 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 ZNF266Q14584 549 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 BATFQ16520 125 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 PKDCCQ504Y2 493 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 ASPGQ86U10 573 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 C9orf62Q8N4C0 152 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 OR2AK2Q8NG84 335 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 OR6T1Q8NGN1 323 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 SVIPQ8NHG7 77 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 POC1BQ8TC44 478 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 TMEM239Q8WW34 195 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 LCN9Q8WX39 176 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 ASB17Q8WXJ9 295 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 HAS2Q92819 552 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 HIST1H2AAQ96QV6 131 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 PTPN18Q99952 460 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 USB1Q9BQ65 265 aaKnown RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 TUBB1Q9H4B7 451 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 IL21RQ9HBE5 538 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 SLC25A19Q9HC21 320 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 EXOSC3Q9NQT5 275 aaKnown RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 MAN2C1Q9NTJ4 1040 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 C1orf123Q9NWV4 160 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms