RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 KRBOX4Q5JUW0 171 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 TMEM150AQ86TG1 271 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 PPP1R3BQ86XI6 285 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 LSMEM2Q8N112 164 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 OR52H1Q8NGJ2 320 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 GLYATL2Q8WU03 294 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 SLC25A46Q96AG3 418 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 TMEM38AQ9H6F2 299 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 C13orf42A0A1B0GVH6 325 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 AQP8O94778 261 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 FUCA1P04066 466 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 EPHA4P54764 986 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 UBE2G2P60604 165 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 CSNK2A1P68400 391 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 NFATC2Q13469 925 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 RTP2Q5QGT7 225 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 GPR26Q8NDV2 337 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 CPEB3Q8NE35 698 aaKnown RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 BRI3BPQ8WY22 251 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 MFSD3Q96ES6 412 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 LRCH3Q96II8 777 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 C11orf84Q9BUA3 381 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 PCDHAC1Q9H158 963 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 TMPRSS5Q9H3S3 457 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 PLEKHJ1Q9NW61 149 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 GAR1Q9NY12 217 aaKnown RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 NXT1Q9UKK6 140 aaKnown RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 UBR3Q6ZT12 1888 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 K7ERU9 68 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 IRF2P14316 349 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 FOXD4Q12950 439 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 TECRLQ5HYJ1 363 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 PSRC1Q6PGN9 363 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 SGK3Q96BR1 496 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 SAT2Q96F10 170 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 IP6K3Q96PC2 410 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 PKP2Q99959 881 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 XYLT2Q9H1B5 865 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 MAN2C1Q9NTJ4 1040 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ZP3P21754 424 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 GPR85P60893 370 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 HSPB3Q12988 150 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 FBXO16Q8IX29 292 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ST7LQ8TDW4 575 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 KIRREL1Q96J84 757 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 DMRTB1Q96MA1 342 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ATF6BQ99941 703 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF251Q9BRH9 671 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ACOXLQ9NUZ1 547 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 SMPD4Q9NXE4 827 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF281Q9Y2X9 895 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 BACE2Q9Y5Z0 518 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 PRAMEF11O60813 436 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 GLSO94925 669 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 RABGGTBP53611 331 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 TAS2R40P59535 323 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 RPS13P62277 151 aaKnown RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF674Q2M3X9 581 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 TXNDC8Q6A555 127 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 AGTRAPQ6RW13 159 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 SUV39H2Q9H5I1 410 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 WDR6Q9NNW5 1121 aaKnown RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 POT1Q9NUX5 634 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 MT-CO1P00395 513 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 DCNP07585 359 aaKnown RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 SMIM10L2AP0DMW4 78 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 SMIM10L2BP0DMW5 78 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 IL1R2P27930 398 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 WEE1P30291 646 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 PYCR1P32322 319 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 CTHP32929 405 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 MRPL19P49406 292 aaKnown RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 TPMTP51580 245 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 CLINT1Q14677 625 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF585AQ6P3V2 769 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 IFNLR1Q8IU57 520 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 NPAS4Q8IUM7 802 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 TSTD1Q8NFU3 115 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 OR4K17Q8NGC6 315 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 GOT1L1Q8NHS2 421 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 GABARAPL1Q9H0R8 117 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 CXXC1Q9P0U4 656 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 EIF2B4Q9UI10 523 aaKnown RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 GPR34Q9UPC5 381 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 TMEM265A0A087WTH1 108 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 SURF4O15260 269 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 CLRN1P58418 232 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 MAXP61244 160 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 SLBPQ14493 270 aaKnown RBP eCLIP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 B3GNTL1Q67FW5 361 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 ARHGEF39Q8N4T4 335 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 FAM160A2Q8N612 972 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 CLRN3Q8NCR9 226 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 ANKRD9Q96BM1 317 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 NKX3-1Q99801 234 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-204ENST00000455883 ACAD8Q9UKU7 415 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 ANKRD34BA5PLL1 514 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 ADAM11O75078 769 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 MTX2O75431 263 aa4.91□□□□□ -1.62
CSMD3-204ENST00000455883 VAMP5O95183 116 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms