RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 FAM198BQ6UWH4 519 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 GDPGP1Q6ZNW5 385 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 NDUFAF7Q7L592 441 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 PRICKLE2Q7Z3G6 844 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 WDR53Q7Z5U6 358 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 ATG4DQ86TL0 474 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 SATL1Q86VE3 508 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 SLC38A9Q8NBW4 561 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 SGTBQ96EQ0 304 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 MRPL48Q96GC5 212 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 PLEKHA8Q96JA3 519 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 IMMP1LQ96LU5 166 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 WDR77Q9BQA1 342 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 EDEM2Q9BV94 578 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 ULBP3Q9BZM4 244 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 SOX17Q9H6I2 414 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 SYNDIG1Q9H7V2 258 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 TBC1D23Q9NUY8 699 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 FBXO34Q9NWN3 711 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 HAO2Q9NYQ3 351 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 SEC14L4Q9UDX3 406 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 WARS2Q9UGM6 360 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 DTX4Q9Y2E6 619 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 EXOSC1Q9Y3B2 195 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 LOXL2Q9Y4K0 774 aa6.27□□□□□ -1.41
ECHDC1-210ENST00000454859 ANKRD33BA6NCL7 494 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 ANKUB1A6NFN9 424 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 NPIPB13A6NJU9 1138 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 NPIPB4C9JG80 1138 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 SLC22A1O15245 554 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 ZNF208O43345 1280 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 OR2T1O43869 369 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 NDUFB2O95178 105 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 HPP00738 406 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 THY1P04216 161 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 GAAP10253 952 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 PEPDP12955 493 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 MYF5P13349 255 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 PAICSP22234 425 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 ADH6P28332 368 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 EVI2BP34910 448 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 NR0B1P51843 470 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 POLR2HP52434 150 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 LAPTM4AQ15012 233 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 NTRK2Q16620 822 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 GLYR1Q49A26 553 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 DPY19L2P2Q6ZN68 376 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 RAB11FIP2Q7L804 512 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 GRINAQ7Z429 371 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 ZAR1Q86SH2 424 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 LAPTM4BQ86VI4 370 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 NKAIN4Q8IVV8 208 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 PROKR2Q8NFJ6 384 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 OR4N2Q8NGD1 307 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 OR4C3Q8NH37 302 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 CNIH3Q8TBE1 160 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 HGDQ93099 445 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 MR1Q95460 341 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 TMEM80Q96HE8 168 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 FRMD6Q96NE9 622 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 WFDC6Q9BQY6 131 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 FKRPQ9H9S5 495 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 ACOT13Q9NPJ3 140 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 CMC2Q9NRP2 79 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 MYOTQ9UBF9 498 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 ZNF229Q9UJW7 825 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 DIMT1Q9UNQ2 313 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 SIGLEC7Q9Y286 467 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 YARS2Q9Y2Z4 477 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 ZNF318Q5VUA4 2279 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 IGHV1-45A0A0A0MS14 117 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 TMEM129A0AVI4 362 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 ELOA3DA6NLF2 546 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 DLL1O00548 723 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 SURF4O15260 269 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 AHCYL1O43865 530 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 OR7A10O76100 309 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 TIAF1O95411 115 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 NADKO95544 446 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 MT-CO3P00414 261 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 STSP08842 583 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 HTR1AP08908 422 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 GP1BBP13224 206 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 IFI30P13284 250 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 GALP22466 123 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 EPHA2P29317 976 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 HTR1FP30939 366 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 APOBEC1P41238 236 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 NBL1P41271 181 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 TUBA1BP68363 451 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 INSM1Q01101 510 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 PLAURQ03405 335 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 EMX1Q04741 257 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 LGALS3BPQ08380 585 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 C1DQ13901 141 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 RAB39AQ14964 217 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 PCOLCEQ15113 449 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 SNAPC1Q16533 368 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 CNPY1Q3B7I2 92 aa6.26□□□□□ -1.41
ECHDC1-210ENST00000454859 ELOA3BQ3SY89 546 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms