RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 TBR1Q16650 682 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 PODNL1Q6PEZ8 512 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 IZUMO2Q6UXV1 221 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 PLEKHM3Q6ZWE6 761 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 FADS6Q8N9I5 356 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 OR5M1Q8NGP8 315 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 SLC7A13Q8TCU3 470 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 TMEM255BQ8WV15 326 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 OIT3Q8WWZ8 545 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 ZCCHC14Q8WYQ9 949 aaKnown RBP9.98□□□□□ -0.81
SCN9A-205ENST00000454569 HAS2Q92819 552 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 EXTL1Q92935 676 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 C3orf49Q96BT1 292 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 SLC41A3Q96GZ6 507 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 SGCZQ96LD1 299 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 SECISBP2Q96T21 854 aaKnown RBP9.98□□□□□ -0.81
SCN9A-205ENST00000454569 SMAD5Q99717 465 aaKnown RBP9.98□□□□□ -0.81
SCN9A-205ENST00000454569 COQ10BQ9H8M1 238 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 SMURF2Q9HAU4 748 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 EXOSC3Q9NQT5 275 aaKnown RBP9.98□□□□□ -0.81
SCN9A-205ENST00000454569 PPP4R1LQ9P1A2 415 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 TESQ9UGI8 421 aaKnown RBP9.98□□□□□ -0.81
SCN9A-205ENST00000454569 TEKT2Q9UIF3 430 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 SLC7A7Q9UM01 511 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 ACACBO00763 2458 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 ITPR1Q14643 2758 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 SVILO95425 2214 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 A0A087WUU8 490 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 IGLV3-32A0A0A0MS00 114 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 A0A0B4J2E0 115 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 A0A1B0GX12 115 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 LRRC3CA6NJW4 275 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 H3BNH8 94 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 TNFRSF11BO00300 401 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 PIP5K1CO60331 668 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 SLC25A12O75746 678 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 WISP2O76076 250 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 GADD45GO95257 159 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 P04436 131 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 H1F0P07305 194 aaKnown RBP9.97□□□□□ -0.81
SCN9A-205ENST00000454569 SP1P08047 785 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 ITGA2P17301 1181 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 IL11P20809 199 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 TAS2R41P59536 307 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 CXADRP78310 365 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 SNTA1Q13424 505 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 QPRTQ15274 297 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 SLC30A6Q6NXT4 461 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 ZNF550Q7Z398 422 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 GALNTL5Q7Z4T8 443 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 RANBP3LQ86VV4 465 aaPredicted RBP9.97□□□□□ -0.81
SCN9A-205ENST00000454569 SULF2Q8IWU5 870 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 LSMEM1Q8N8F7 131 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 KDF1Q8NAX2 398 aaPredicted RBP9.97□□□□□ -0.81
SCN9A-205ENST00000454569 OR9Q2Q8NGE9 314 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 OR5W2Q8NH69 310 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 POC1BQ8TC44 478 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 DNAJC9Q8WXX5 260 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 EME1Q96AY2 570 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 JSRP1Q96MG2 331 aaPredicted RBP9.97□□□□□ -0.81
SCN9A-205ENST00000454569 ZNF347Q96SE7 839 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 ZNF184Q99676 751 aaPredicted RBP9.97□□□□□ -0.81
SCN9A-205ENST00000454569 ZNF559Q9BR84 538 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 FNDC11Q9BVV2 318 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 VCXQ9H320 206 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 ARMC7Q9H6L4 198 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 SACM1LQ9NTJ5 587 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 PGPEP1Q9NXJ5 209 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 CNIH4Q9P003 139 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 VDAC3Q9Y277 283 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 SAMHD1Q9Y3Z3 626 aaKnown RBP9.97□□□□□ -0.81
SCN9A-205ENST00000454569 FAM32AQ9Y421 112 aaKnown RBP9.97□□□□□ -0.81
SCN9A-205ENST00000454569 ALPK2Q86TB3 2170 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 TRAPPC13A5PLN9 417 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 ANKRD33BA6NCL7 494 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 PEX1O43933 1283 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 FMO6PO60774 539 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 NUDT14O95848 222 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 IL2RAP01589 272 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 ZNF23P17027 643 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 ZNF26P17031 533 aaPredicted RBP9.97□□□□□ -0.81
SCN9A-205ENST00000454569 CNR1P21554 472 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 CLK3P49761 638 aaKnown RBP9.97□□□□□ -0.81
SCN9A-205ENST00000454569 TNFSF10P50591 281 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 UGT2B15P54855 530 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 ARG2P78540 354 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 TAF11Q15544 211 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 LINC00303Q3SY05 128 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 OTUD3Q5T2D3 398 aaPredicted RBP9.97□□□□□ -0.81
SCN9A-205ENST00000454569 ZNF770Q6IQ21 691 aaPredicted RBP9.97□□□□□ -0.81
SCN9A-205ENST00000454569 LINC00114Q6XXX2 140 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 LRRC69Q6ZNQ3 347 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 PRICKLE2Q7Z3G6 844 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 GPALPP1Q8IXQ4 340 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 DND1Q8IYX4 353 aaKnown RBP9.97□□□□□ -0.81
SCN9A-205ENST00000454569 OFCC1Q8IZS5 231 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 RNF217Q8TC41 542 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 SLC35B4Q969S0 331 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 DNAJA3Q96EY1 480 aa9.97□□□□□ -0.81
SCN9A-205ENST00000454569 ALPK1Q96QP1 1244 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms