RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 TAPBPLQ9BX59 468 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 SCML1Q9UN30 329 aa11.09□□□□□ -0.63
SMPD4-213ENST00000454468 ANKRD61A6NGH8 418 aa11.08□□□□□ -0.63
SMPD4-213ENST00000454468 ZSCAN5BA6NJL1 495 aa11.08□□□□□ -0.63
SMPD4-213ENST00000454468 GABRPO00591 440 aa11.08□□□□□ -0.63
SMPD4-213ENST00000454468 KIAA1024LP59773 190 aa11.08□□□□□ -0.63
SMPD4-213ENST00000454468 SDR16C5Q8N3Y7 309 aa11.08□□□□□ -0.63
SMPD4-213ENST00000454468 TMCO6Q96DC7 493 aa11.08□□□□□ -0.63
SMPD4-213ENST00000454468 GAS2L1Q99501 681 aaPredicted RBP11.08□□□□□ -0.63
SMPD4-213ENST00000454468 GABRG3Q99928 467 aa11.08□□□□□ -0.63
SMPD4-213ENST00000454468 NUFIP1Q9UHK0 495 aaKnown RBP11.08□□□□□ -0.63
SMPD4-213ENST00000454468 ZNF221Q9UK13 617 aa11.08□□□□□ -0.63
SMPD4-213ENST00000454468 HCRTR2O43614 444 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 SCO2O43819 266 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 GALR3O60755 368 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-213ENST00000454468 OR2B3O76000 313 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 KCNK2O95069 426 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 LIMS3P0CW19 117 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 LIMS4P0CW20 117 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 OMPP47874 163 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 SKP1P63208 163 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 MRPS21P82921 87 aaKnown RBP11.08□□□□□ -0.64
SMPD4-213ENST00000454468 SF3B4Q15427 424 aaKnown RBP eCLIP11.08□□□□□ -0.641e-6■■■■■ 54.2
SMPD4-213ENST00000454468 OCLNQ16625 522 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 LYPD4Q6UWN0 246 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-213ENST00000454468 TSSK2Q96PF2 358 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 DCLRE1CQ96SD1 692 aaKnown RBP11.08□□□□□ -0.64
SMPD4-213ENST00000454468 ELF4Q99607 663 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-213ENST00000454468 SLC25A19Q9HC21 320 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 C19orf53Q9UNZ5 99 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-213ENST00000454468 GPR179Q6PRD1 2367 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 HYKKA2RU49 373 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 C2orf72A6NCS6 295 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 OR5K3A6NET4 321 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 C17orf105B2RV13 164 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 FAM47E-STBD1D6RA91 191 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 PRICKLE3O43900 615 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-213ENST00000454468 NID1P14543 1247 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 HTR2AP28223 471 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 FOXK2Q01167 660 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 TBRG1Q3YBR2 411 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 ZFP69Q49AA0 526 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 WDR88Q6ZMY6 472 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 CA13Q8N1Q1 262 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 OR4C3Q8NH37 302 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 SPRTNQ9H040 489 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-213ENST00000454468 BRD7Q9NPI1 651 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 TRIM36Q9NQ86 728 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 POT1Q9NUX5 634 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 CCDC59Q9P031 241 aaKnown RBP11.08□□□□□ -0.64
SMPD4-213ENST00000454468 ZNF346Q9UL40 294 aaKnown RBP11.08□□□□□ -0.64
SMPD4-213ENST00000454468 DTX4Q9Y2E6 619 aa11.08□□□□□ -0.64
SMPD4-213ENST00000454468 TRAV6A0A075B6T7 132 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 IRGMA1A4Y4 181 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 TVP23AA6NH52 213 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 CDC40O60508 579 aaKnown RBP eCLIP11.07□□□□□ -0.64
SMPD4-213ENST00000454468 OPN1LWP04000 364 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 HIST1H2ABP04908 130 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 EDNRAP25101 427 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 GRK6P43250 576 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 CDK5Q00535 292 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 KCNJ8Q15842 424 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 MZT2AQ6P582 158 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 HIST3H2AQ7L7L0 130 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 C19orf47Q8N9M1 422 aaKnown RBP11.07□□□□□ -0.64
SMPD4-213ENST00000454468 RCBTB1Q8NDN9 531 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 APOBEC4Q8WW27 367 aaKnown RBP11.07□□□□□ -0.64
SMPD4-213ENST00000454468 HIST1H2ACQ93077 130 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 NMNAT3Q96T66 252 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 MMP17Q9ULZ9 603 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 A0A0B4J203 849 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 CENPXA8MT69 81 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 SYT5O00445 386 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 CHRNB1P11230 501 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 FPR3P25089 353 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 FRKP42685 505 aaPredicted RBP11.07□□□□□ -0.64
SMPD4-213ENST00000454468 CAMK2BQ13554 666 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 DECR1Q16698 335 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 LCN1P1Q5VSP4 162 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 NXNL2Q5VZ03 156 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 KIAA0895LQ68EN5 471 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 PAMR1Q6UXH9 720 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 UXS1Q8NBZ7 420 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 FAM174AQ8TBP5 190 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 KATNB1Q9BVA0 655 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 TMEM150CB9EJG8 249 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 SURF4O15260 269 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 TBX19O60806 448 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 HK1P19367 917 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 MAGEB1P43366 347 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 MLC1Q15049 377 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 PON3Q15166 354 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 P2RY14Q15391 338 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 ARHGAP11BQ3KRB8 267 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 UBE2Q1Q7Z7E8 422 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 SERPINA12Q8IW75 414 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 SMPDL3BQ92485 455 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 C10orf90Q96M02 699 aa11.07□□□□□ -0.64
SMPD4-213ENST00000454468 FOLH1BQ9HBA9 442 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms