RNA–Protein interactions for RNA: ENST00000453992.5

NCL-205, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-205ENST00000453992 CD247P20963 164 aa17.43■□□□□ 0.38
NCL-205ENST00000453992 ME2P23368 584 aa17.43■□□□□ 0.38
NCL-205ENST00000453992 HTR1EP28566 365 aa17.43■□□□□ 0.38
NCL-205ENST00000453992 KDELR2P33947 212 aa17.43■□□□□ 0.38
NCL-205ENST00000453992 ACAA2P42765 397 aaKnown RBP17.43■□□□□ 0.38
NCL-205ENST00000453992 HTR3AP46098 478 aa17.43■□□□□ 0.38
NCL-205ENST00000453992 KCNJ5P48544 419 aa17.43■□□□□ 0.38
NCL-205ENST00000453992 CLDN18P56856 261 aa17.43■□□□□ 0.38
NCL-205ENST00000453992 SESN3P58005 492 aa17.43■□□□□ 0.38
NCL-205ENST00000453992 RAC1P63000 192 aa17.43■□□□□ 0.38
NCL-205ENST00000453992 SELENBP1Q13228 472 aa17.43■□□□□ 0.38
NCL-205ENST00000453992 SF3B4Q15427 424 aaKnown RBP eCLIP17.43■□□□□ 0.385e-18■■■■■ 31.6
NCL-205ENST00000453992 FXNQ16595 210 aa17.43■□□□□ 0.38
NCL-205ENST00000453992 C4orf17Q53FE4 359 aa17.43■□□□□ 0.38
NCL-205ENST00000453992 SMYD1Q8NB12 490 aa17.43■□□□□ 0.38
NCL-205ENST00000453992 OR5M9Q8NGP3 310 aa17.43■□□□□ 0.38
NCL-205ENST00000453992 CDRT15Q96T59 188 aa17.43■□□□□ 0.38
NCL-205ENST00000453992 GMPR2Q9P2T1 348 aaKnown RBP17.43■□□□□ 0.38
NCL-205ENST00000453992 TESQ9UGI8 421 aaKnown RBP17.43■□□□□ 0.38
NCL-205ENST00000453992 USP9XQ93008 2570 aaPredicted RBP17.42■□□□□ 0.38
NCL-205ENST00000453992 MYO7BQ6PIF6 2116 aa17.42■□□□□ 0.38
NCL-205ENST00000453992 AHRRA9YTQ3 701 aa17.42■□□□□ 0.38
NCL-205ENST00000453992 H3BML4 177 aa17.42■□□□□ 0.38
NCL-205ENST00000453992 CXCR6O00574 342 aa17.42■□□□□ 0.38
NCL-205ENST00000453992 LGI1O95970 557 aa17.42■□□□□ 0.38
NCL-205ENST00000453992 APOBEC1P41238 236 aaKnown RBP17.42■□□□□ 0.38
NCL-205ENST00000453992 SLC1A3P43003 542 aa17.42■□□□□ 0.38
NCL-205ENST00000453992 IDH2P48735 452 aaKnown RBP17.42■□□□□ 0.38
NCL-205ENST00000453992 COPZ1P61923 177 aa17.42■□□□□ 0.38
NCL-205ENST00000453992 DUSP7Q16829 419 aa17.42■□□□□ 0.38
NCL-205ENST00000453992 GLIPR1L2Q4G1C9 344 aa17.42■□□□□ 0.38
NCL-205ENST00000453992 LRRC23Q53EV4 343 aaPredicted RBP17.42■□□□□ 0.38
NCL-205ENST00000453992 C1QL3Q5VWW1 255 aa17.42■□□□□ 0.38
NCL-205ENST00000453992 PLEKHM3Q6ZWE6 761 aa17.42■□□□□ 0.38
NCL-205ENST00000453992 COMTD1Q86VU5 262 aa17.42■□□□□ 0.38
NCL-205ENST00000453992 ULK2Q8IYT8 1036 aa17.42■□□□□ 0.38
NCL-205ENST00000453992 MEIOBQ8N635 442 aa17.42■□□□□ 0.38
NCL-205ENST00000453992 GPR32P1Q8NGA4 272 aa17.42■□□□□ 0.38
NCL-205ENST00000453992 ZNF524Q96C55 264 aa17.42■□□□□ 0.38
NCL-205ENST00000453992 NPAS1Q99742 590 aa17.42■□□□□ 0.38
NCL-205ENST00000453992 CD300AQ9UGN4 299 aa17.42■□□□□ 0.38
NCL-205ENST00000453992 BAG5Q9UL15 447 aa17.42■□□□□ 0.38
NCL-205ENST00000453992 CAMK2AQ9UQM7 478 aa17.42■□□□□ 0.38
NCL-205ENST00000453992 LRRK2Q5S007 2527 aa17.41■□□□□ 0.38
NCL-205ENST00000453992 GJE1A6NN92 205 aa17.41■□□□□ 0.38
NCL-205ENST00000453992 E9PLN8 166 aa17.41■□□□□ 0.38
NCL-205ENST00000453992 H0Y3Z8 333 aa17.41■□□□□ 0.38
NCL-205ENST00000453992 GGT1P19440 569 aa17.41■□□□□ 0.38
NCL-205ENST00000453992 ACVR2AP27037 513 aa17.41■□□□□ 0.38
NCL-205ENST00000453992 STARP49675 285 aa17.41■□□□□ 0.38
NCL-205ENST00000453992 RGS8P57771 180 aaPredicted RBP17.41■□□□□ 0.38
NCL-205ENST00000453992 MERTKQ12866 999 aa17.41■□□□□ 0.38
NCL-205ENST00000453992 NRF1Q16656 503 aa17.41■□□□□ 0.38
NCL-205ENST00000453992 WBP2NLQ6ICG8 309 aa17.41■□□□□ 0.38
NCL-205ENST00000453992 C3orf33Q6P1S2 294 aa17.41■□□□□ 0.38
NCL-205ENST00000453992 ZNF585AQ6P3V2 769 aa17.41■□□□□ 0.38
NCL-205ENST00000453992 MTFR2Q6P444 385 aa17.41■□□□□ 0.38
NCL-205ENST00000453992 RINLQ6ZS11 566 aa17.41■□□□□ 0.38
NCL-205ENST00000453992 ZPLD1Q8TCW7 415 aa17.41■□□□□ 0.38
NCL-205ENST00000453992 PHF10Q8WUB8 498 aaKnown RBP17.41■□□□□ 0.38
NCL-205ENST00000453992 SLC25A43Q8WUT9 341 aaPredicted RBP17.41■□□□□ 0.38
NCL-205ENST00000453992 FIG4Q92562 907 aa17.41■□□□□ 0.38
NCL-205ENST00000453992 ARHGDIGQ99819 225 aa17.41■□□□□ 0.38
NCL-205ENST00000453992 VKORC1Q9BQB6 163 aa17.41■□□□□ 0.38
NCL-205ENST00000453992 SH3BGRL2Q9UJC5 107 aa17.41■□□□□ 0.38
NCL-205ENST00000453992 PRPF19Q9UMS4 504 aaKnown RBP17.41■□□□□ 0.38
NCL-205ENST00000453992 SLC5A6Q9Y289 635 aa17.41■□□□□ 0.38
NCL-205ENST00000453992 SPIN1Q9Y657 262 aaPredicted RBP17.41■□□□□ 0.38
NCL-205ENST00000453992 PCNX1Q96RV3 2341 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 FRS3O43559 492 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 FMO6PO60774 539 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 FESP07332 822 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 PRG2P13727 222 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 FKBP2P26885 142 aaKnown RBP17.4■□□□□ 0.38
NCL-205ENST00000453992 POLR2HP52434 150 aaKnown RBP17.4■□□□□ 0.38
NCL-205ENST00000453992 MAP2K6P52564 334 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 ZNF136P52737 540 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 NCALDP61601 193 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 ACSF3Q4G176 576 aaPredicted RBP17.4■□□□□ 0.38
NCL-205ENST00000453992 CYBRD1Q53TN4 286 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 C1orf185Q5T7R7 199 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 C6orf89Q6UWU4 347 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 GGNQ86UU5 652 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 RANBP3LQ86VV4 465 aaPredicted RBP17.4■□□□□ 0.38
NCL-205ENST00000453992 RNF148Q8N7C7 305 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 LSMEM1Q8N8F7 131 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 PROX1Q92786 737 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 SERINC1Q9NRX5 453 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 TAS2R1Q9NYW7 299 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 MAGEL2Q9UJ55 1249 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 SLC9A8Q9Y2E8 581 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 MEMO1Q9Y316 297 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 MPDZO75970 2070 aa17.4■□□□□ 0.38
NCL-205ENST00000453992 NCOA6Q14686 2063 aaPredicted RBP17.4■□□□□ 0.38
NCL-205ENST00000453992 KIAA1549Q9HCM3 1950 aa17.39■□□□□ 0.37
NCL-205ENST00000453992 CCL21O00585 134 aa17.39■□□□□ 0.37
NCL-205ENST00000453992 LRRTM2O43300 516 aa17.39■□□□□ 0.37
NCL-205ENST00000453992 GMNNO75496 209 aa17.39■□□□□ 0.37
NCL-205ENST00000453992 PER3P56645 1201 aa17.39■□□□□ 0.37
NCL-205ENST00000453992 BNIP1Q12981 228 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms