RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 F5H5P2 479 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 GAPDHSO14556 408 aaPredicted RBP11.56□□□□□ -0.56
UBE3B-204ENST00000449510 PLGP00747 810 aaPredicted RBP11.56□□□□□ -0.56
UBE3B-204ENST00000449510 CHRM4P08173 479 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 PGAM2P15259 253 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 MAKP20794 623 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 DCTDP32321 178 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 GK2Q14410 553 aaPredicted RBP11.56□□□□□ -0.56
UBE3B-204ENST00000449510 EXOSC7Q15024 291 aaKnown RBP11.56□□□□□ -0.56
UBE3B-204ENST00000449510 SMAD2Q15796 467 aaKnown RBP11.56□□□□□ -0.56
UBE3B-204ENST00000449510 OCLNQ16625 522 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 TUSC1Q2TAM9 212 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 GLYR1Q49A26 553 aaPredicted RBP11.56□□□□□ -0.56
UBE3B-204ENST00000449510 SLC6A19Q695T7 634 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 NHLRC1Q6VVB1 395 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 PRSS42Q7Z5A4 293 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 SIRT6Q8N6T7 355 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 ZNF511Q8NB15 262 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 OR11H4Q8NGC9 324 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 OR4C15Q8NGM1 316 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 ANGPTL6Q8NI99 470 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 NEURL3Q96EH8 262 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 TCEAL4Q96EI5 215 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 CXorf58Q96LI9 332 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 MARVELD1Q9BSK0 173 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 BACE2Q9Y5Z0 518 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 COL4A5P29400 1685 aa11.56□□□□□ -0.56
UBE3B-204ENST00000449510 H7C1C5 153 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 ATG12O94817 140 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 WNT1P04628 370 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 ADH1AP07327 375 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 OR8G3PP0DMU2 310 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 ACTR1BP42025 376 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 ACTR1AP61163 376 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 LCN6P62502 163 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 ALG10BQ5I7T1 473 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 OR8D4Q8NGM9 314 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 FAM46BQ96A09 425 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 LRRC46Q96FV0 321 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 RADILQ96JH8 1075 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 IGFLR1Q9H665 355 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 MKKSQ9NPJ1 570 aaPredicted RBP11.55□□□□□ -0.56
UBE3B-204ENST00000449510 KCMF1Q9P0J7 381 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 MIA3Q5JRA6 1907 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 C1QTNF3-AMACRE9PGA6 284 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 XKRYO14609 159 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 FZD6O60353 706 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 PRH1P02810 166 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 PIPP12273 146 aaPredicted RBP11.55□□□□□ -0.56
UBE3B-204ENST00000449510 CMPK1P30085 196 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 SELENOPP49908 381 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 AIMP2Q13155 320 aaKnown RBP11.55□□□□□ -0.56
UBE3B-204ENST00000449510 KRBOX4Q5JUW0 171 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 OR56A3Q8NH54 315 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 SPACA7Q96KW9 195 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 SLC46A2Q9BY10 475 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 SRMSQ9H3Y6 488 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 EMC7Q9NPA0 242 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 SIDT1Q9NXL6 827 aaKnown RBP11.55□□□□□ -0.56
UBE3B-204ENST00000449510 CKLFQ9UBR5 152 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 TMEM129A0AVI4 362 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 HMGA1P17096 107 aaKnown RBP11.55□□□□□ -0.56
UBE3B-204ENST00000449510 POU3F2P20265 443 aaPredicted RBP11.55□□□□□ -0.56
UBE3B-204ENST00000449510 PDX1P52945 283 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 TNFRSF17Q02223 184 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 CDNFQ49AH0 187 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 GPER1Q99527 375 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 SYNDIG1Q9H7V2 258 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 METTL8Q9H825 291 aaKnown RBP11.55□□□□□ -0.56
UBE3B-204ENST00000449510 CERS4Q9HA82 394 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 MARCH5Q9NX47 278 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 LAMP5Q9UJQ1 280 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 CABIN1Q9Y6J0 2220 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 COL24A1Q17RW2 1714 aa11.55□□□□□ -0.56
UBE3B-204ENST00000449510 MCIDASD6RGH6 385 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 TO15178 435 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 FADS1O60427 444 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 IGLV3-27P01718 113 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 ACHEP22303 614 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 CFL1P23528 166 aaKnown RBP11.54□□□□□ -0.56
UBE3B-204ENST00000449510 SLC6A6P31641 620 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 S100A11P31949 105 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 METAP1P53582 386 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 TAS2R43P59537 309 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 KCNAB1Q14722 419 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 DUSP6Q16828 381 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 LGALSLQ3ZCW2 172 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-204ENST00000449510 ZNF628Q5EBL2 1059 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 CD276Q5ZPR3 534 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 VITQ6UXI7 678 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 GRASPQ7Z6J2 395 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-204ENST00000449510 ZNF687Q8N1G0 1237 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 CPA6Q8N4T0 437 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 OR5M1Q8NGP8 315 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 RNF170Q96K19 258 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 HRH4Q9H3N8 390 aa11.54□□□□□ -0.56
UBE3B-204ENST00000449510 CCDC86Q9H6F5 360 aaKnown RBP11.54□□□□□ -0.56
UBE3B-204ENST00000449510 PHPT1Q9NRX4 125 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-204ENST00000449510 GPR55Q9Y2T6 319 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-204ENST00000449510 KCNE1BA0A087WTH5 132 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms