RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 SORDQ00796 357 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 FAM27E3Q08E93 113 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 SELENBP1Q13228 472 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 RGNQ15493 299 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 AGKQ53H12 422 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 PAGE3Q5JUK9 113 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 FAM214BQ7L5A3 538 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 TMEM200AQ86VY9 491 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 ARFGAP2Q8N6H7 521 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 ZNF610Q8N9Z0 462 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 STON2Q8WXE9 905 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 TMEM234Q8WY98 164 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 PMM1Q92871 262 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 GMPPAQ96IJ6 420 aaPredicted RBP11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 SRXN1Q9BYN0 137 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 NPHS2Q9NP85 383 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 EXOSC3Q9NQT5 275 aaKnown RBP11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 ACER3Q9NUN7 267 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 TMEM45AQ9NWC5 275 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 SLC25A37Q9NYZ2 338 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 PDZD2O15018 2839 aa11.4□□□□□ -0.59
PRPF40A-203ENST00000448428 A0A1W2PNR3 127 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 SS18L1O75177 396 aaPredicted RBP11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 PLGP00747 810 aaPredicted RBP11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 BCHEP06276 602 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 DBIP07108 87 aaKnown RBP11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 NUDT7P0C024 238 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 CD8BP10966 210 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 EPXP11678 715 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 IL7RP16871 459 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 NCF2P19878 526 aaPredicted RBP11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 CPOXP36551 454 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 IRX1P78414 480 aaPredicted RBP11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 MERTKQ12866 999 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 SQLEQ14534 574 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 DAZAP2Q15038 168 aaPredicted RBP11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 ZNF239Q16600 458 aaKnown RBP11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 LRIF1Q5T3J3 769 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 PLEKHM3Q6ZWE6 761 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 MSRB3Q8IXL7 192 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 CMIPQ8IY22 773 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 OR52P1PQ8NH57 321 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 ZNF563Q8TA94 476 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 WDR60Q8WVS4 1066 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 CPNE4Q96A23 557 aaPredicted RBP11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 CCDC106Q9BWC9 280 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 COQ10BQ9H8M1 238 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 TIGARQ9NQ88 270 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 PLSCR4Q9NRQ2 329 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 THUMPD1Q9NXG2 353 aaKnown RBP11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 DNAJB12Q9NXW2 375 aaKnown RBP11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 CALML5Q9NZT1 146 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 P2RX2Q9UBL9 471 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 PROCRQ9UNN8 238 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 ABCA12Q86UK0 2595 aa11.39□□□□□ -0.59
PRPF40A-203ENST00000448428 DSPPQ9NZW4 1301 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 A6NNC1 897 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 AP3D1O14617 1153 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 ENPP1P22413 925 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 SLC7A1P30825 629 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 CD79BP40259 229 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 APOBEC1P41238 236 aaKnown RBP11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 IDH2P48735 452 aaKnown RBP11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 PCYT1AP49585 367 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 CRISP3P54108 245 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 CTBP2P56545 445 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 RAC3P60763 192 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 RPS26P11Q5JNZ5 115 aaPredicted RBP11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 MRPL2Q5T653 305 aaKnown RBP11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 GTF2IRD2BQ6EKJ0 949 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 GTF2IRD2Q86UP8 949 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 VRK2Q86Y07 508 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 ADGRG3Q86Y34 549 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 PEX5LQ8IYB4 626 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 OR6K3Q8NGY3 331 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 RNF128Q8TEB7 428 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 MAL2Q969L2 176 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 TMEM19Q96HH6 336 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 REXO5Q96IC2 774 aaKnown RBP11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 OR5B2Q96R09 309 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 GPATCH1Q9BRR8 931 aaKnown RBP11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 POLDIP3Q9BY77 421 aaKnown RBP11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 RABEP2Q9H5N1 569 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 ZNF385DQ9H6B1 395 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 CTPS2Q9NRF8 586 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 SERINC1Q9NRX5 453 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 GLRX2Q9NS18 164 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 RASSF1Q9NS23 344 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 RLIMQ9NVW2 624 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 ELOVL5Q9NYP7 299 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 VAPAQ9P0L0 249 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 EMC9Q9Y3B6 208 aa11.38□□□□□ -0.59
PRPF40A-203ENST00000448428 TRBV5-3A0A0A0MS03 114 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 A0A0G2JND7 137 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 A0A0G2JPF8 293 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 A0A1W2PP18 115 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 HNRNPCL2B2RXH8 293 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 HNRNPCL3B7ZW38 293 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 HNRNPCL1O60812 293 aaKnown RBP11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 PRKD3O94806 890 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms