RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 ADAM5Q6NVV9 412 aa25.08■■□□□ 1.61
CBX4-202ENST00000448310 BHLHA15Q7RTS1 189 aaPredicted RBP25.08■■□□□ 1.61
CBX4-202ENST00000448310 HSD17B8Q92506 261 aa25.08■■□□□ 1.61
CBX4-202ENST00000448310 ROPN1BQ9BZX4 212 aaPredicted RBP25.08■■□□□ 1.61
CBX4-202ENST00000448310 LAT2Q9GZY6 243 aa25.08■■□□□ 1.61
CBX4-202ENST00000448310 ESRP2Q9H6T0 727 aaKnown RBP25.08■■□□□ 1.61
CBX4-202ENST00000448310 ROPN1Q9HAT0 212 aaPredicted RBP25.08■■□□□ 1.61
CBX4-202ENST00000448310 NOP53Q9NZM5 478 aaKnown RBP25.08■■□□□ 1.61
CBX4-202ENST00000448310 ETV2O00321 342 aaPredicted RBP25.07■■□□□ 1.6
CBX4-202ENST00000448310 TYROBPO43914 113 aa25.07■■□□□ 1.6
CBX4-202ENST00000448310 TMCC2O75069 709 aa25.07■■□□□ 1.6
CBX4-202ENST00000448310 UGT2B17O75795 530 aa25.07■■□□□ 1.6
CBX4-202ENST00000448310 LYZL6O75951 148 aa25.07■■□□□ 1.6
CBX4-202ENST00000448310 UBTFL6P0CB48 400 aaPredicted RBP25.07■■□□□ 1.6
CBX4-202ENST00000448310 OR3A2P47893 321 aa25.07■■□□□ 1.6
CBX4-202ENST00000448310 RASGEF1BQ0VAM2 473 aa25.07■■□□□ 1.6
CBX4-202ENST00000448310 MAD2L1Q13257 205 aaPredicted RBP25.07■■□□□ 1.6
CBX4-202ENST00000448310 TNK1Q13470 666 aa25.07■■□□□ 1.6
CBX4-202ENST00000448310 P2RY6Q15077 328 aa25.07■■□□□ 1.6
CBX4-202ENST00000448310 ZNF141Q15928 474 aa25.07■■□□□ 1.6
CBX4-202ENST00000448310 C3orf33Q6P1S2 294 aa25.07■■□□□ 1.6
CBX4-202ENST00000448310 SEZ6L2Q6UXD5 910 aa25.07■■□□□ 1.6
CBX4-202ENST00000448310 NUDCD3Q8IVD9 361 aa25.07■■□□□ 1.6
CBX4-202ENST00000448310 KBTBD8Q8NFY9 601 aa25.07■■□□□ 1.6
CBX4-202ENST00000448310 FBXW5Q969U6 566 aa25.07■■□□□ 1.6
CBX4-202ENST00000448310 POTEKPQ9BYX7 375 aa25.07■■□□□ 1.6
CBX4-202ENST00000448310 OR51I1Q9H343 314 aa25.07■■□□□ 1.6
CBX4-202ENST00000448310 NGBQ9NPG2 151 aa25.07■■□□□ 1.6
CBX4-202ENST00000448310 WDR91A4D1P6 747 aa25.06■■□□□ 1.6
CBX4-202ENST00000448310 KIAA1324LA8MWY0 1029 aaPredicted RBP25.06■■□□□ 1.6
CBX4-202ENST00000448310 STX11O75558 287 aa25.06■■□□□ 1.6
CBX4-202ENST00000448310 CSTAP01040 98 aa25.06■■□□□ 1.6
CBX4-202ENST00000448310 SESN3P58005 492 aa25.06■■□□□ 1.6
CBX4-202ENST00000448310 PPP2R2BQ00005 443 aa25.06■■□□□ 1.6
CBX4-202ENST00000448310 BSPH1Q075Z2 132 aa25.06■■□□□ 1.6
CBX4-202ENST00000448310 ARHGAP11BQ3KRB8 267 aa25.06■■□□□ 1.6
CBX4-202ENST00000448310 ANKRD46Q86W74 232 aa25.06■■□□□ 1.6
CBX4-202ENST00000448310 OR4A15Q8NGL6 344 aa25.06■■□□□ 1.6
CBX4-202ENST00000448310 ASIC5Q9NY37 505 aa25.06■■□□□ 1.6
CBX4-202ENST00000448310 DUXAA6NLW8 204 aa25.05■■□□□ 1.6
CBX4-202ENST00000448310 CYTIPO60759 359 aa25.05■■□□□ 1.6
CBX4-202ENST00000448310 AK1P00568 194 aa25.05■■□□□ 1.6
CBX4-202ENST00000448310 DANCRP0C864 163 aa25.05■■□□□ 1.6
CBX4-202ENST00000448310 CDKN1AP38936 164 aa25.05■■□□□ 1.6
CBX4-202ENST00000448310 MERTKQ12866 999 aa25.05■■□□□ 1.6
CBX4-202ENST00000448310 STK11Q15831 433 aa25.05■■□□□ 1.6
CBX4-202ENST00000448310 MAPK14Q16539 360 aa25.05■■□□□ 1.6
CBX4-202ENST00000448310 Q6ZT83 130 aa25.05■■□□□ 1.6
CBX4-202ENST00000448310 C16orf62Q7Z3J2 963 aa25.05■■□□□ 1.6
CBX4-202ENST00000448310 ZNF781Q8N8C0 355 aa25.05■■□□□ 1.6
CBX4-202ENST00000448310 PIWIL2Q8TC59 973 aaKnown RBP25.05■■□□□ 1.6
CBX4-202ENST00000448310 ZNF350Q9GZX5 532 aa25.05■■□□□ 1.6
CBX4-202ENST00000448310 AKTIPQ9H8T0 292 aa25.05■■□□□ 1.6
CBX4-202ENST00000448310 MAGED1Q9Y5V3 778 aaPredicted RBP25.05■■□□□ 1.6
CBX4-202ENST00000448310 CR1P17927 2039 aa25.05■■□□□ 1.6
CBX4-202ENST00000448310 ANK3Q12955 4377 aaKnown RBP25.05■■□□□ 1.6
CBX4-202ENST00000448310 SONP18583 2426 aaKnown RBP25.04■■□□□ 1.6
CBX4-202ENST00000448310 DPRXA6NFQ7 191 aa25.04■■□□□ 1.6
CBX4-202ENST00000448310 OVOL3O00110 214 aa25.04■■□□□ 1.6
CBX4-202ENST00000448310 RNASET2O00584 256 aaKnown RBP25.04■■□□□ 1.6
CBX4-202ENST00000448310 DNAJA2O60884 412 aa25.04■■□□□ 1.6
CBX4-202ENST00000448310 BCAS1O75363 584 aaPredicted RBP25.04■■□□□ 1.6
CBX4-202ENST00000448310 FESP07332 822 aa25.04■■□□□ 1.6
CBX4-202ENST00000448310 VEZF1Q14119 521 aa25.04■■□□□ 1.6
CBX4-202ENST00000448310 ZNF672Q499Z4 452 aaPredicted RBP25.04■■□□□ 1.6
CBX4-202ENST00000448310 MAPK1IP1LQ8NDC0 245 aa25.04■■□□□ 1.6
CBX4-202ENST00000448310 AENQ8WTP8 325 aaKnown RBP25.04■■□□□ 1.6
CBX4-202ENST00000448310 SMAP2Q8WU79 429 aaPredicted RBP25.04■■□□□ 1.6
CBX4-202ENST00000448310 ST8SIA1Q92185 356 aa25.04■■□□□ 1.6
CBX4-202ENST00000448310 ZNF75CPQ92670 426 aaPredicted RBP25.04■■□□□ 1.6
CBX4-202ENST00000448310 RAB8BQ92930 207 aa25.04■■□□□ 1.6
CBX4-202ENST00000448310 ARL8AQ96BM9 186 aa25.04■■□□□ 1.6
CBX4-202ENST00000448310 CPSF4O95639 269 aaKnown RBP25.03■■□□□ 1.6
CBX4-202ENST00000448310 OR12D1P0DN82 309 aa25.03■■□□□ 1.6
CBX4-202ENST00000448310 DIO1P49895 249 aa25.03■■□□□ 1.6
CBX4-202ENST00000448310 CLEC12BQ2HXU8 276 aa25.03■■□□□ 1.6
CBX4-202ENST00000448310 TNFAIP8L2Q6P589 184 aaPredicted RBP25.03■■□□□ 1.6
CBX4-202ENST00000448310 HMGN2P46Q86SG4 172 aa25.03■■□□□ 1.6
CBX4-202ENST00000448310 LSRQ86X29 649 aaPredicted RBP25.03■■□□□ 1.6
CBX4-202ENST00000448310 GTPBP3Q969Y2 492 aaKnown RBP25.03■■□□□ 1.6
CBX4-202ENST00000448310 DNAJA3Q96EY1 480 aa25.03■■□□□ 1.6
CBX4-202ENST00000448310 SERINC1Q9NRX5 453 aa25.03■■□□□ 1.6
CBX4-202ENST00000448310 EXD2Q9NVH0 621 aa25.03■■□□□ 1.6
CBX4-202ENST00000448310 PCDHGB4Q9UN71 923 aa25.03■■□□□ 1.6
CBX4-202ENST00000448310 PGCP20142 388 aa25.02■■□□□ 1.6
CBX4-202ENST00000448310 IGHV1-2P23083 117 aa25.02■■□□□ 1.6
CBX4-202ENST00000448310 PHC1P78364 1004 aa25.02■■□□□ 1.6
CBX4-202ENST00000448310 KRTAP1-1Q07627 177 aa25.02■■□□□ 1.6
CBX4-202ENST00000448310 FAPQ12884 760 aa25.02■■□□□ 1.6
CBX4-202ENST00000448310 CHI3L2Q15782 390 aa25.02■■□□□ 1.6
CBX4-202ENST00000448310 HEPHL1Q6MZM0 1159 aa25.02■■□□□ 1.6
CBX4-202ENST00000448310 TMPPEQ6ZT21 453 aa25.02■■□□□ 1.6
CBX4-202ENST00000448310 EIF3MQ7L2H7 374 aaKnown RBP25.02■■□□□ 1.6
CBX4-202ENST00000448310 OR8J2Q8NGG1 315 aa25.02■■□□□ 1.6
CBX4-202ENST00000448310 XAGE5Q8WWM1 108 aa25.02■■□□□ 1.6
CBX4-202ENST00000448310 TMEM234Q8WY98 164 aa25.02■■□□□ 1.6
CBX4-202ENST00000448310 TRMT61AQ96FX7 289 aaKnown RBP25.02■■□□□ 1.6
CBX4-202ENST00000448310 DPY30Q9C005 99 aa25.02■■□□□ 1.6
CBX4-202ENST00000448310 C20orf27Q9GZN8 174 aa25.02■■□□□ 1.6
CBX4-202ENST00000448310 ACER3Q9NUN7 267 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms