RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 OR52I2Q8NH67 350 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 FBXL12Q9NXK8 326 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 LRP6O75581 1613 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 ID2Q02363 134 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 DPPA4Q7L190 304 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 OR10R2Q8NGX6 335 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 DMRT3Q9NQL9 472 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 ELF5Q9UKW6 265 aaPredicted RBP7.39□□□□□ -1.23
SMG1-202ENST00000446231 SPIN3Q5JUX0 258 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 NDUFAF7Q7L592 441 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 CLTCQ00610 1675 aaKnown RBP7.39□□□□□ -1.23
SMG1-202ENST00000446231 CD63P08962 238 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 ZNF44P15621 663 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 SDHAP31040 664 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 COL19A1Q14993 1142 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 MOAP1Q96BY2 351 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 TLR9Q9NR96 1032 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 PPT2Q9UMR5 302 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 ARRDC5A6NEK1 342 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 LGI1O95970 557 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 MPC1LP0DKB6 136 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 CXADRP78310 365 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 PRAMEF19Q5SWL8 479 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 ARHGAP40Q5TG30 622 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 LRFN4Q6PJG9 635 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 KIAA1324Q6UXG2 1013 aaKnown RBP7.38□□□□□ -1.23
SMG1-202ENST00000446231 FAM129CQ86XR2 697 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 EID2Q8N6I1 236 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 ASB11Q8WXH4 323 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 PTP4A1Q93096 173 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 CSNK1G3Q9Y6M4 447 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 A0A0A6YYH2 397 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 IGKV6-21A0A0C4DH24 114 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 A6NJ64 397 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 SRMP19623 302 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 RFC3P40938 356 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 HTRA4P83105 476 aaPredicted RBP7.38□□□□□ -1.23
SMG1-202ENST00000446231 ZNF273Q14593 569 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 GSG1Q2KHT4 349 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 FAM219BQ5XKK7 198 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 MSRB3Q8IXL7 192 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 LINC01599Q8WXQ3 324 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 FUBP3Q96I24 572 aaKnown RBP eCLIP7.38□□□□□ -1.23
SMG1-202ENST00000446231 HS6ST2Q96MM7 605 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 TAPBPLQ9BX59 468 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 NXF2Q9GZY0 626 aaKnown RBP7.38□□□□□ -1.23
SMG1-202ENST00000446231 SLC6A14Q9UN76 642 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 A0A0B4J2A0 478 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 CD53P19397 219 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 S1PR1P21453 382 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 TAGLN2P37802 199 aaKnown RBP7.38□□□□□ -1.23
SMG1-202ENST00000446231 AKR1C3P42330 323 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 SIRPAP78324 504 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 AWAT2Q6E213 333 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 HSD17B13Q7Z5P4 300 aaPredicted RBP7.38□□□□□ -1.23
SMG1-202ENST00000446231 APH1BQ8WW43 257 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 MTHFD2LQ9H903 347 aaPredicted RBP7.38□□□□□ -1.23
SMG1-202ENST00000446231 SHPKQ9UHJ6 478 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 COLEC10Q9Y6Z7 277 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 C1QAP02745 245 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 OR8U9P0C7N5 309 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 SEC22AQ96IW7 307 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 URADA6NGE7 173 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 ZAR1LA6NP61 321 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 A8MVJ9 347 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 RNASEK-C17orf49H0YIS7 233 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 SUOXP51687 545 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 RASGEF1BQ0VAM2 473 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 ENPP2Q13822 863 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 C9orf152Q5JTZ5 239 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 RBM18Q96H35 190 aaKnown RBP7.38□□□□□ -1.23
SMG1-202ENST00000446231 TMEM169Q96HH4 297 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 DCCP43146 1447 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 RAD1O60671 282 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 CD300LGQ6UXG3 332 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 LINC00518Q8N0U6 118 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 SFXN5Q8TD22 340 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 MYLIPQ8WY64 445 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 C12orf40Q86WS4 652 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 IKZF5Q9H5V7 419 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 ZNF629Q9UEG4 869 aaPredicted RBP7.38□□□□□ -1.23
SMG1-202ENST00000446231 FAM208AQ9UK61 1670 aaKnown RBP7.38□□□□□ -1.23
SMG1-202ENST00000446231 SCN8AQ9UQD0 1980 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 TCAPO15273 167 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 NDUFS4O43181 175 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 FBXO24O75426 580 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 PPP1R3DO95685 299 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 RPL17P18621 184 aaKnown RBP7.38□□□□□ -1.23
SMG1-202ENST00000446231 HIST2H3AQ71DI3 136 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 THEM6Q8WUY1 208 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 PGAP3Q96FM1 320 aaPredicted RBP7.38□□□□□ -1.23
SMG1-202ENST00000446231 SUSD3Q96L08 255 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 PITHD1Q9GZP4 211 aaPredicted RBP7.38□□□□□ -1.23
SMG1-202ENST00000446231 UBQLN3Q9H347 655 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 CENPMQ9NSP4 180 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 GAPDHSO14556 408 aaPredicted RBP7.38□□□□□ -1.23
SMG1-202ENST00000446231 SURF4O15260 269 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 DPM1O60762 260 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 IFNA1P01562 189 aa7.38□□□□□ -1.23
SMG1-202ENST00000446231 CALCRP30988 508 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms