RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 NEK7Q8TDX7 302 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 MS4A6EQ96DS6 147 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 LMF2Q9BU23 707 aaKnown RBP15.51■□□□□ 0.07
TCOF1-206ENST00000445265 ZNF337Q9Y3M9 751 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 BRWD3Q6RI45 1802 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 GAPDHSO14556 408 aaPredicted RBP15.51■□□□□ 0.07
TCOF1-206ENST00000445265 H2BFMP0C1H6 154 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 SHC1P29353 583 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 COL9A2Q14055 689 aaPredicted RBP15.51■□□□□ 0.07
TCOF1-206ENST00000445265 FAM205BPQ63HN1 556 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 TMEM205Q6UW68 189 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 OR56B4Q8NH76 319 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 NXPE3Q969Y0 559 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 PRR14Q9BWN1 585 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 HHATLQ9HCP6 504 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 LOC100509620A0A075B734 347 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 MEGF11A6BM72 1044 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 SCO2O43819 266 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 PRSS3P35030 304 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 PSMB10P40306 273 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 ZNF750Q32MQ0 723 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 PAQR6Q6TCH4 344 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 ZNF322Q6U7Q0 402 aaPredicted RBP15.51■□□□□ 0.07
TCOF1-206ENST00000445265 ABHD4Q8TB40 342 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 ZNF471Q9BX82 626 aaPredicted RBP15.51■□□□□ 0.07
TCOF1-206ENST00000445265 SEMA4GQ9NTN9 838 aa15.51■□□□□ 0.07
TCOF1-206ENST00000445265 TRIP12Q14669 1992 aaPredicted RBP15.51■□□□□ 0.07
TCOF1-206ENST00000445265 S100A6P06703 90 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 OR2T7P0C7T2 308 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 CBX5P45973 191 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 ERVK-25P63136 954 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 UBXN2BQ14CS0 331 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 LRFN4Q6PJG9 635 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 OR2T27Q8NH04 317 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 TMEM41AQ96HV5 264 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 MN1Q10571 1320 aaPredicted RBP15.5■□□□□ 0.07
TCOF1-206ENST00000445265 TRAV18A0A075B6X5 111 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 FAM171A2A8MVW0 826 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 H0YGG7 62 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 UBL3O95164 117 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 UQCRC1P31930 480 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 C21orf58P58505 322 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 ARF3P61204 181 aaPredicted RBP15.5■□□□□ 0.07
TCOF1-206ENST00000445265 FOXK2Q01167 660 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 FGL1Q08830 312 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 FAPQ12884 760 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 C1orf94Q6P1W5 598 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 FAM111BQ6SJ93 734 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 GALNT6Q8NCL4 622 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 GHSRQ92847 366 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 SLC25A19Q9HC21 320 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 CA3P07451 260 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 RAE1P78406 368 aaKnown RBP15.5■□□□□ 0.07
TCOF1-206ENST00000445265 FXNQ16595 210 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 KCTD20Q7Z5Y7 419 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 SPERTQ8NA61 448 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 OR5M3Q8NGP4 307 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 CASTOR1Q8WTX7 329 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 CNOT9Q92600 299 aaKnown RBP15.5■□□□□ 0.07
TCOF1-206ENST00000445265 TGM7Q96PF1 710 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 SLC25A18Q9H1K4 315 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 CHST8Q9H2A9 424 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 METTL8Q9H825 291 aaKnown RBP15.5■□□□□ 0.07
TCOF1-206ENST00000445265 C13orf42A0A1B0GVH6 325 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 ARPC1BO15143 372 aaKnown RBP15.5■□□□□ 0.07
TCOF1-206ENST00000445265 RAB40ALP0C0E4 278 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 EPHA5P54756 1037 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 CTBP2P56545 445 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 FBXO42Q6P3S6 717 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 RAB40AQ8WXH6 277 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 ELMOD3Q96FG2 381 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 CDCA3Q99618 268 aaPredicted RBP15.5■□□□□ 0.07
TCOF1-206ENST00000445265 BCL2L14Q9BZR8 327 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 MKRN2Q9H000 416 aaKnown RBP15.5■□□□□ 0.07
TCOF1-206ENST00000445265 EPHA6Q9UF33 1036 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 PRELID1Q9Y255 219 aa15.5■□□□□ 0.07
TCOF1-206ENST00000445265 A0A0A6YYC8 382 aaPredicted RBP15.49■□□□□ 0.07
TCOF1-206ENST00000445265 I3L1I5 382 aaPredicted RBP15.49■□□□□ 0.07
TCOF1-206ENST00000445265 HCKP08631 526 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 TEAD1P28347 426 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 CTGFP29279 349 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 SLC6A8P48029 635 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 ZNF41P51814 821 aaPredicted RBP15.49■□□□□ 0.07
TCOF1-206ENST00000445265 TPBGQ13641 420 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 PCGF3Q3KNV8 242 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 CCDC190Q86UF4 302 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 SLC35F3Q8IY50 421 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 SLC6A5Q9Y345 797 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 NPFFR2Q9Y5X5 522 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 PTPRFP10586 1907 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 A0A1W2PR48 441 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 ZNF208O43345 1280 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 THEGLP0DJG4 465 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 CRMP1Q14194 572 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 RAB12Q6IQ22 244 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 KCTD9Q7L273 389 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 ZNF761Q86XN6 746 aaPredicted RBP15.49■□□□□ 0.07
TCOF1-206ENST00000445265 NKAIN4Q8IVV8 208 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 SPPL3Q8TCT6 385 aa15.49■□□□□ 0.07
TCOF1-206ENST00000445265 GPR174Q9BXC1 333 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms