RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 ADAM11O75078 769 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 SLC22A3O75751 556 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 H6PDO95479 791 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 IL6P05231 212 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 GSNP06396 782 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 DNASE1P24855 282 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 LOXP28300 417 aaPredicted RBP16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 KCNJ5P48544 419 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 MVDP53602 400 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 TXNL4AP83876 142 aaKnown RBP16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 SYPL1Q16563 259 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 GSTA3Q16772 222 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 COX20Q5RI15 118 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 NXNQ6DKJ4 435 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 GTF2IRD2BQ6EKJ0 949 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 ZNF621Q6ZSS3 439 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 ZNF550Q7Z398 422 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 GTF2IRD2Q86UP8 949 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 ANKFN1Q8N957 763 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 TRNT1Q96Q11 434 aaKnown RBP16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 ZBTB18Q99592 522 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 QRSL1Q9H0R6 528 aaKnown RBP16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 SLC38A1Q9H2H9 487 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 TIGARQ9NQ88 270 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 ACER3Q9NUN7 267 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 ZIM2Q9NZV7 527 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 C6orf203Q9P0P8 240 aaPredicted RBP16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 EDARQ9UNE0 448 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 SLC35A3Q9Y2D2 325 aa16.87■□□□□ 0.29
HMGB3P22-201ENST00000442010 A0A1W2PNR3 127 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 CLDN24A6NM45 220 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 CYP7B1O75881 506 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 RAF1P04049 648 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 CHRM4P08173 479 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 PABPC4LP0CB38 370 aaKnown RBP16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 PGCP20142 388 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 RPS4Y1P22090 263 aaKnown RBP16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 ENPP1P22413 925 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 RAC3P60763 192 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 KCNJ10P78508 379 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 RNPS1Q15287 305 aaKnown RBP16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 MAPK11Q15759 364 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 EXOC3L2Q2M3D2 409 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 GPAT3Q53EU6 434 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 C3orf33Q6P1S2 294 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 EPGNQ6UW88 154 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 STAC2Q6ZMT1 411 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 PLEKHM3Q6ZWE6 761 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 FCRLAQ7L513 359 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 HMGN2P46Q86SG4 172 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 ATP6V1C2Q8NEY4 427 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 C7orf26Q96N11 449 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 ALPK1Q96QP1 1244 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 MED18Q9BUE0 208 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 GP6Q9HCN6 339 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 EXOSC3Q9NQT5 275 aaKnown RBP16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 ZNF226Q9NYT6 803 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 KLHL13Q9P2N7 655 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 ING1Q9UK53 422 aaPredicted RBP16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 LIPT1Q9Y234 373 aa16.86■□□□□ 0.29
HMGB3P22-201ENST00000442010 C2CD3Q4AC94 2353 aa16.85■□□□□ 0.29
HMGB3P22-201ENST00000442010 AGAP5A6NIR3 686 aa16.85■□□□□ 0.29
HMGB3P22-201ENST00000442010 THBDP07204 575 aa16.85■□□□□ 0.29
HMGB3P22-201ENST00000442010 TTMPQ5BVD1 217 aa16.85■□□□□ 0.29
HMGB3P22-201ENST00000442010 LRRC74BQ6ZQY2 392 aa16.85■□□□□ 0.29
HMGB3P22-201ENST00000442010 BEND4Q6ZU67 534 aa16.85■□□□□ 0.29
HMGB3P22-201ENST00000442010 NUFIP2Q7Z417 695 aaKnown RBP16.85■□□□□ 0.29
HMGB3P22-201ENST00000442010 TUSC5Q8IXB3 177 aa16.85■□□□□ 0.29
HMGB3P22-201ENST00000442010 OR9I1Q8NGQ6 314 aa16.85■□□□□ 0.29
HMGB3P22-201ENST00000442010 TMEM234Q8WY98 164 aa16.85■□□□□ 0.29
HMGB3P22-201ENST00000442010 CCDC106Q9BWC9 280 aa16.85■□□□□ 0.29
HMGB3P22-201ENST00000442010 KLHL4Q9C0H6 718 aa16.85■□□□□ 0.29
HMGB3P22-201ENST00000442010 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.85■□□□□ 0.29
HMGB3P22-201ENST00000442010 USH1CQ9Y6N9 552 aa16.85■□□□□ 0.29
HMGB3P22-201ENST00000442010 RFXANKO14593 260 aa16.84■□□□□ 0.29
HMGB3P22-201ENST00000442010 UBDO15205 165 aa16.84■□□□□ 0.29
HMGB3P22-201ENST00000442010 PRKD3O94806 890 aa16.84■□□□□ 0.29
HMGB3P22-201ENST00000442010 ZCCHC18P0CG32 403 aa16.84■□□□□ 0.29
HMGB3P22-201ENST00000442010 KLK2P20151 261 aa16.84■□□□□ 0.29
HMGB3P22-201ENST00000442010 MAGEA8P43361 318 aa16.84■□□□□ 0.29
HMGB3P22-201ENST00000442010 MRPL19P49406 292 aaKnown RBP16.84■□□□□ 0.29
HMGB3P22-201ENST00000442010 MERTKQ12866 999 aa16.84■□□□□ 0.29
HMGB3P22-201ENST00000442010 ANKRD34AQ69YU3 496 aa16.84■□□□□ 0.29
HMGB3P22-201ENST00000442010 TFAP2EQ6VUC0 442 aa16.84■□□□□ 0.29
HMGB3P22-201ENST00000442010 MSANTD1Q6ZTZ1 278 aa16.84■□□□□ 0.29
HMGB3P22-201ENST00000442010 PNPT1Q8TCS8 783 aaKnown RBP16.84■□□□□ 0.29
HMGB3P22-201ENST00000442010 REXO5Q96IC2 774 aaKnown RBP16.84■□□□□ 0.29
HMGB3P22-201ENST00000442010 ATP6V1G3Q96LB4 118 aa16.84■□□□□ 0.29
HMGB3P22-201ENST00000442010 TMUB1Q9BVT8 246 aa16.84■□□□□ 0.29
HMGB3P22-201ENST00000442010 C12orf49Q9H741 205 aa16.84■□□□□ 0.29
HMGB3P22-201ENST00000442010 BCO1Q9HAY6 547 aa16.84■□□□□ 0.29
HMGB3P22-201ENST00000442010 IGHV3-15A0A0B4J1V0 119 aa16.83■□□□□ 0.28
HMGB3P22-201ENST00000442010 SMAD9O15198 467 aaKnown RBP16.83■□□□□ 0.28
HMGB3P22-201ENST00000442010 DIAPH2O60879 1101 aa16.83■□□□□ 0.28
HMGB3P22-201ENST00000442010 GCM2O75603 506 aaPredicted RBP16.83■□□□□ 0.28
HMGB3P22-201ENST00000442010 KRT75O95678 551 aa16.83■□□□□ 0.28
HMGB3P22-201ENST00000442010 PPP3CBP16298 524 aa16.83■□□□□ 0.28
HMGB3P22-201ENST00000442010 CD53P19397 219 aa16.83■□□□□ 0.28
HMGB3P22-201ENST00000442010 PSMB1P20618 241 aaKnown RBP16.83■□□□□ 0.28
HMGB3P22-201ENST00000442010 CADP27708 2225 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms