RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 TMEM27Q9HBJ8 222 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 IFT46Q9NQC8 304 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 ACSS1Q9NUB1 689 aaPredicted RBP8.42□□□□□ -1.06
COPB1-202ENST00000439561 LYARQ9NX58 379 aaKnown RBP8.42□□□□□ -1.06
COPB1-202ENST00000439561 SLCO1C1Q9NYB5 712 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 NDOR1Q9UHB4 597 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 POMT2Q9UKY4 750 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 LOC285556D6RIA3 1793 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 C7orf66A4D0T2 115 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 ANXA2P2A6NMY6 339 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 SEC14L5O43304 696 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 NARSO43776 548 aaKnown RBP8.41□□□□□ -1.06
COPB1-202ENST00000439561 AIFM1O95831 613 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 MAS1P04201 325 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 ASGR2P07307 311 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 ANXA2P07355 339 aaKnown RBP8.41□□□□□ -1.06
COPB1-202ENST00000439561 CTSLP07711 333 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 FAM157BP0CG42 384 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 ZNF35P13682 527 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 CTRB1P17538 263 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 PTH2RP49190 550 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 PUS10Q3MIT2 529 aaKnown RBP8.41□□□□□ -1.06
COPB1-202ENST00000439561 GXYLT1Q4G148 440 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 FAM26DQ5JW98 314 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 RNLSQ5VYX0 342 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 CTRB2Q6GPI1 263 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 MBOAT2Q6ZWT7 520 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 DGLUCYQ7Z3D6 616 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 CMTM4Q8IZR5 234 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 TMEM239Q8WW34 195 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 TCEAL4Q96EI5 215 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 TRMT2BQ96GJ1 504 aaKnown RBP8.41□□□□□ -1.06
COPB1-202ENST00000439561 HSPA12BQ96MM6 686 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 TEAD3Q99594 435 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 EXO5Q9H790 373 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 TMEM185BQ9H7F4 350 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 SLC39A1Q9NY26 324 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 FBXL3Q9UKT7 428 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 PATJQ8NI35 1801 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 OR52A4PA6NMU1 304 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 ZNF879B4DU55 563 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 KLHL18O94889 574 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 LIPCP11150 499 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 AK4P27144 223 aaPredicted RBP8.41□□□□□ -1.06
COPB1-202ENST00000439561 DCTDP32321 178 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 AKR1C2P52895 323 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 AKR1C1Q04828 323 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 FAM74A1Q5RGS3 127 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 CD200R1LQ6Q8B3 271 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 TPRA1Q86W33 373 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 LHFPL5Q8TAF8 219 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 SYNPRQ8TBG9 265 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 APOBEC4Q8WW27 367 aaKnown RBP8.41□□□□□ -1.06
COPB1-202ENST00000439561 BPIFA2Q96DR5 249 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 DTD2Q96FN9 168 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 ZNF514Q96K75 400 aaPredicted RBP8.41□□□□□ -1.06
COPB1-202ENST00000439561 MFFQ9GZY8 342 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 HRASLSQ9HDD0 168 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 NOX4Q9NPH5 578 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 SPHK2Q9NRA0 654 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 LIPT1Q9Y234 373 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 OR10H1Q9Y4A9 318 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 OR1A2Q9Y585 309 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 BRCA2P51587 3418 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 A0A1W2PR48 441 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 WASH3PC4AMC7 463 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 TOR1AO14656 332 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 DRD2P14416 443 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 HOXB3P14651 431 aaPredicted RBP8.41□□□□□ -1.06
COPB1-202ENST00000439561 SYN1P17600 705 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 ACADLP28330 430 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 FAUP35544 74 aaKnown RBP8.41□□□□□ -1.06
COPB1-202ENST00000439561 CCR9P51686 369 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 SORDQ00796 357 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 FOXK2Q01167 660 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 PCGF3Q3KNV8 242 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 MPP7Q5T2T1 576 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 YOD1Q5VVQ6 348 aaPredicted RBP8.41□□□□□ -1.06
COPB1-202ENST00000439561 ADGRG3Q86Y34 549 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 CNRIP1Q96F85 164 aaPredicted RBP8.41□□□□□ -1.06
COPB1-202ENST00000439561 ZNF416Q9BWM5 594 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 ZNF471Q9BX82 626 aaPredicted RBP8.41□□□□□ -1.06
COPB1-202ENST00000439561 SLC7A5P2Q9GIP4 190 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 ENKD1Q9H0I2 346 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 SLC38A1Q9H2H9 487 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 COMMD9Q9P000 198 aa8.41□□□□□ -1.06
COPB1-202ENST00000439561 GBF1Q92538 1859 aa8.4□□□□□ -1.06
COPB1-202ENST00000439561 DUXAA6NLW8 204 aa8.4□□□□□ -1.06
COPB1-202ENST00000439561 H7C2Y5 167 aa8.4□□□□□ -1.06
COPB1-202ENST00000439561 ABLIM3O94929 683 aa8.4□□□□□ -1.06
COPB1-202ENST00000439561 CXCL14O95715 111 aa8.4□□□□□ -1.06
COPB1-202ENST00000439561 PRNPP04156 253 aa8.4□□□□□ -1.06
COPB1-202ENST00000439561 LPLP06858 475 aa8.4□□□□□ -1.06
COPB1-202ENST00000439561 SBK2P0C263 348 aa8.4□□□□□ -1.06
COPB1-202ENST00000439561 SULT1A3P0DMM9 295 aa8.4□□□□□ -1.06
COPB1-202ENST00000439561 SULT1A4P0DMN0 295 aa8.4□□□□□ -1.06
COPB1-202ENST00000439561 GTF2F2P13984 249 aa8.4□□□□□ -1.06
COPB1-202ENST00000439561 S100A11P31949 105 aa8.4□□□□□ -1.06
COPB1-202ENST00000439561 PCBP4P57723 403 aaKnown RBP8.4□□□□□ -1.06
COPB1-202ENST00000439561 ERVK-21P61565 698 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms