RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 JKAMPQ9P055 326 aa8.31□□□□□ -1.08
AC011228.1-201ENST00000439027 NTMQ9P121 344 aa8.31□□□□□ -1.08
AC011228.1-201ENST00000439027 CD300AQ9UGN4 299 aa8.31□□□□□ -1.08
AC011228.1-201ENST00000439027 USP22Q9UPT9 525 aa8.31□□□□□ -1.08
AC011228.1-201ENST00000439027 AP3M1Q9Y2T2 418 aa8.31□□□□□ -1.08
AC011228.1-201ENST00000439027 WIF1Q9Y5W5 379 aa8.31□□□□□ -1.08
AC011228.1-201ENST00000439027 GMEB1Q9Y692 573 aa8.31□□□□□ -1.08
AC011228.1-201ENST00000439027 ZNF469Q96JG9 3925 aaPredicted RBP8.31□□□□□ -1.08
AC011228.1-201ENST00000439027 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 SH3D21A4FU49 640 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 SLC35F4A4IF30 521 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 SCO2O43819 266 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 TSPAN2O60636 221 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 CIB2O75838 187 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 SMNDC1O75940 238 aaKnown RBP eCLIP8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 HRGP04196 525 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 HMGN2P05204 90 aaKnown RBP8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 IFI6P09912 130 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 CT45A8P0DMV1 189 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 CT45A9P0DMV2 189 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 HSD17B1P14061 328 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 HK1P19367 917 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 MATN1P21941 496 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 LORP23490 312 aaPredicted RBP8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 PRIM2P49643 509 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 LHX2P50458 406 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 GZMMP51124 257 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 GFRA1P56159 465 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 EEF1A1P68104 462 aaKnown RBP8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 FADDQ13158 208 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 LASP1Q14847 261 aaKnown RBP8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 CYP51A1Q16850 503 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 CT45A2Q5DJT8 189 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 EEF1A1P5Q5VTE0 462 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 TNFAIP8L2Q6P589 184 aaPredicted RBP8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 NPSR1Q6W5P4 371 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 CALHM3Q86XJ0 350 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 UBQLNLQ8IYU4 475 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 CNEP1R1Q8N9A8 125 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 OR2T12Q8NG77 320 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 OR4N2Q8NGD1 307 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 GIMAP5Q96F15 307 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 OTUB1Q96FW1 271 aaPredicted RBP8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 SLC35A4Q96G79 324 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 VSTM2LQ96N03 204 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 MS4A4EQ96PG1 132 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 ACTRT3Q9BYD9 372 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 DSN1Q9H410 356 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 SERHL2Q9H4I8 314 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 ALG2Q9H553 416 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 PLEKHF2Q9H8W4 249 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 PPP4R1LQ9P1A2 415 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 NDRG3Q9UGV2 375 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 SLC7A8Q9UHI5 535 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 FAF1Q9UNN5 650 aaPredicted RBP8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 NSD1Q96L73 2696 aaPredicted RBP8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 VPS13CQ709C8 3753 aa8.3□□□□□ -1.08
AC011228.1-201ENST00000439027 A0A1W2PNV4 684 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 SLC22A20A6NK97 555 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 C17orf51A8MQB3 221 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 FAM220BPB1ANY3 271 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 HMGN4O00479 90 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 GSTA4O15217 222 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 ZIC3O60481 467 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 DNAJA2O60884 412 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 COQ9O75208 318 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 TNFRSF21O75509 655 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 GOSR1O95249 250 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 PSMG1O95456 288 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 TGM6O95932 706 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 OR12D1P0DN82 309 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 PEPDP12955 493 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 FOSL1P15407 271 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 CHMP24386 653 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 RFX3P48380 749 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 KHKP50053 298 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 ANXA11P50995 505 aaKnown RBP8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 PNLIPRP2P54317 469 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 CLDN18P56856 261 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 DSTNP60981 165 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 SIRPAP78324 504 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 PSPHP78330 225 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 MS4A2Q01362 244 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 ADRM1Q16186 407 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 KRTAP21-3Q3LHN1 58 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 SPATS1Q496A3 300 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 GCNT6Q5T4J0 391 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 RAET1LQ5VY80 246 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 MFSD12Q6NUT3 480 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 ADGRE4PQ86SQ3 457 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 SERPINA11Q86U17 422 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 PTOV1Q86YD1 416 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 MICU2Q8IYU8 434 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 WFDC11Q8NEX6 87 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 OR5D16Q8NGK9 328 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 OR5M1Q8NGP8 315 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 MIPOL1Q8TD10 442 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 XAGE5Q8WWM1 108 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 SLC9A6Q92581 669 aa8.29□□□□□ -1.08
AC011228.1-201ENST00000439027 JADE3Q92613 823 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms