RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 ESPNLQ6ZVH7 1005 aa9.82□□□□□ -0.84
CSTF3-203ENST00000438862 USP43Q70EL4 1123 aa9.82□□□□□ -0.84
CSTF3-203ENST00000438862 NUFIP2Q7Z417 695 aaKnown RBP9.82□□□□□ -0.84
CSTF3-203ENST00000438862 PEG10Q86TG7 708 aaKnown RBP9.82□□□□□ -0.84
CSTF3-203ENST00000438862 OR2V1Q8NHB1 315 aa9.82□□□□□ -0.84
CSTF3-203ENST00000438862 WDR20Q8TBZ3 569 aa9.82□□□□□ -0.84
CSTF3-203ENST00000438862 ERP27Q96DN0 273 aa9.82□□□□□ -0.84
CSTF3-203ENST00000438862 CHMP6Q96FZ7 201 aa9.82□□□□□ -0.84
CSTF3-203ENST00000438862 REXO5Q96IC2 774 aaKnown RBP9.82□□□□□ -0.84
CSTF3-203ENST00000438862 JMJD8Q96S16 334 aa9.82□□□□□ -0.84
CSTF3-203ENST00000438862 INPP5KQ9BT40 448 aa9.82□□□□□ -0.84
CSTF3-203ENST00000438862 SOX7Q9BT81 388 aa9.82□□□□□ -0.84
CSTF3-203ENST00000438862 ELOVL6Q9H5J4 265 aa9.82□□□□□ -0.84
CSTF3-203ENST00000438862 NMRK1Q9NWW6 199 aa9.82□□□□□ -0.84
CSTF3-203ENST00000438862 ZDHHC2Q9UIJ5 367 aa9.82□□□□□ -0.84
CSTF3-203ENST00000438862 CES1P1Q9UKY3 287 aa9.82□□□□□ -0.84
CSTF3-203ENST00000438862 PCDHB10Q9UN67 800 aa9.82□□□□□ -0.84
CSTF3-203ENST00000438862 A0A1W2PNR3 127 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 GMNCA6NCL1 334 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 TRPC5OSA6NMA1 111 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 HDAC3O15379 428 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 SHOX2O60902 331 aaPredicted RBP9.81□□□□□ -0.84
CSTF3-203ENST00000438862 CRCPO75575 148 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 SEMA3DO95025 777 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 PGM3O95394 542 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 YES1P07947 543 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 TSPAN8P19075 237 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 APOBEC3AP31941 199 aaPredicted RBP9.81□□□□□ -0.84
CSTF3-203ENST00000438862 FEN1P39748 380 aaKnown RBP9.81□□□□□ -0.84
CSTF3-203ENST00000438862 ARL1P40616 181 aaPredicted RBP9.81□□□□□ -0.84
CSTF3-203ENST00000438862 CARD18P57730 90 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 RAC1P63000 192 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 C17orf67Q0P5P2 114 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 CPSF6Q16630 551 aaKnown RBP eCLIP9.81□□□□□ -0.845e-6■■■■□ 22.5
CSTF3-203ENST00000438862 SH2D4BQ5SQS7 431 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 HBMQ6B0K9 141 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 TTC19Q6DKK2 380 aaPredicted RBP9.81□□□□□ -0.84
CSTF3-203ENST00000438862 RPS27LQ71UM5 84 aaKnown RBP9.81□□□□□ -0.84
CSTF3-203ENST00000438862 TUSC5Q8IXB3 177 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 ZNF781Q8N8C0 355 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 CDYL2Q8N8U2 506 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 OSTF1Q92882 214 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 EFHD2Q96C19 240 aaPredicted RBP9.81□□□□□ -0.84
CSTF3-203ENST00000438862 METTL17Q9H7H0 456 aaPredicted RBP9.81□□□□□ -0.84
CSTF3-203ENST00000438862 SLCO1B3Q9NPD5 702 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 TIGARQ9NQ88 270 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 NPAP1Q9NZP6 1156 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 KLHL13Q9P2N7 655 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 ADAM29Q9UKF5 820 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 PCDHA9Q9Y5H5 950 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 DNAJC15Q9Y5T4 150 aa9.81□□□□□ -0.84
CSTF3-203ENST00000438862 A0A087WZY1 265 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 IGLV3-32A0A0A0MS00 114 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 ZNF814B7Z6K7 855 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 SLC28A1O00337 649 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 MANBAO00462 879 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 TNFSF11O14788 317 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 NDUFB5O43674 189 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 LYPLA1O75608 230 aaPredicted RBP9.8□□□□□ -0.84
CSTF3-203ENST00000438862 ERAL1O75616 437 aaKnown RBP9.8□□□□□ -0.84
CSTF3-203ENST00000438862 LYZL6O75951 148 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 PRKD3O94806 890 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 NTN1O95631 604 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 VIMP08670 466 aaKnown RBP9.8□□□□□ -0.84
CSTF3-203ENST00000438862 GGT1P19440 569 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 PRPH2P23942 346 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 CHN2P52757 468 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 DVL1P1P54792 670 aaPredicted RBP9.8□□□□□ -0.84
CSTF3-203ENST00000438862 CORO7P57737 925 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 HILS1P60008 231 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 GNGT1P63211 74 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 CSTF3Q12996 717 aaKnown RBP9.8□□□□□ -0.84
CSTF3-203ENST00000438862 STX5Q13190 355 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 CARTPTQ16568 116 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 SMU1Q2TAY7 513 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 TCHHL1Q5QJ38 904 aaPredicted RBP9.8□□□□□ -0.84
CSTF3-203ENST00000438862 PAGE2Q7Z2X7 111 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 MYLK4Q86YV6 388 aaPredicted RBP9.8□□□□□ -0.84
CSTF3-203ENST00000438862 SLC44A2Q8IWA5 706 aaPredicted RBP9.8□□□□□ -0.84
CSTF3-203ENST00000438862 ZNF675Q8TD23 568 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 RNF128Q8TEB7 428 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 SELENOMQ8WWX9 145 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 VSTM2LQ96N03 204 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 SERPINI1Q99574 410 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 NSRP1Q9H0G5 558 aaKnown RBP9.8□□□□□ -0.84
CSTF3-203ENST00000438862 HHATLQ9HCP6 504 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 MYNNQ9NPC7 610 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 FAM120CQ9NX05 1096 aaKnown RBP9.8□□□□□ -0.84
CSTF3-203ENST00000438862 SIRT5Q9NXA8 310 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 AHSPQ9NZD4 102 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 OR10H1Q9Y4A9 318 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 PCDHGB1Q9Y5G3 927 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 ZNF780BQ9Y6R6 833 aa9.8□□□□□ -0.84
CSTF3-203ENST00000438862 HEATR1Q9H583 2144 aaKnown RBP9.79□□□□□ -0.84
CSTF3-203ENST00000438862 A0A0J9YW62 118 aa9.79□□□□□ -0.84
CSTF3-203ENST00000438862 OR5H1A6NKK0 313 aa9.79□□□□□ -0.84
CSTF3-203ENST00000438862 RGS14O43566 566 aa9.79□□□□□ -0.84
CSTF3-203ENST00000438862 KLK1P06870 262 aa9.79□□□□□ -0.84
CSTF3-203ENST00000438862 TACSTD2P09758 323 aa9.79□□□□□ -0.84
CSTF3-203ENST00000438862 TROVE2P10155 538 aaKnown RBP eCLIP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms