RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 DAG1Q14118 895 aa20.94■□□□□ 0.94
CPSF4-204ENST00000436336 INPP5JQ15735 1006 aaPredicted RBP20.94■□□□□ 0.94
CPSF4-204ENST00000436336 RNF217Q8TC41 542 aa20.94■□□□□ 0.94
CPSF4-204ENST00000436336 ACOT11Q8WXI4 607 aaPredicted RBP20.94■□□□□ 0.94
CPSF4-204ENST00000436336 C3orf49Q96BT1 292 aa20.94■□□□□ 0.94
CPSF4-204ENST00000436336 RBM4BQ9BQ04 359 aaKnown RBP20.94■□□□□ 0.94
CPSF4-204ENST00000436336 RBM4Q9BWF3 364 aaKnown RBP20.94■□□□□ 0.94
CPSF4-204ENST00000436336 TAS2R10Q9NYW0 307 aa20.94■□□□□ 0.94
CPSF4-204ENST00000436336 RAXQ9Y2V3 346 aa20.94■□□□□ 0.94
CPSF4-204ENST00000436336 HRH3Q9Y5N1 445 aa20.94■□□□□ 0.94
CPSF4-204ENST00000436336 GNB5O14775 395 aa20.93■□□□□ 0.94
CPSF4-204ENST00000436336 TRIM3O75382 744 aaPredicted RBP20.93■□□□□ 0.94
CPSF4-204ENST00000436336 MST1P26927 711 aa20.93■□□□□ 0.94
CPSF4-204ENST00000436336 ALDH3A2P51648 485 aa20.93■□□□□ 0.94
CPSF4-204ENST00000436336 ARG2P78540 354 aa20.93■□□□□ 0.94
CPSF4-204ENST00000436336 PPP2R2BQ00005 443 aa20.93■□□□□ 0.94
CPSF4-204ENST00000436336 QPRTQ15274 297 aa20.93■□□□□ 0.94
CPSF4-204ENST00000436336 SEC23BQ15437 767 aa20.93■□□□□ 0.94
CPSF4-204ENST00000436336 TOMM34Q15785 309 aaPredicted RBP20.93■□□□□ 0.94
CPSF4-204ENST00000436336 GALNT4Q8N4A0 578 aa20.93■□□□□ 0.94
CPSF4-204ENST00000436336 MDS2Q8NDY4 140 aa20.93■□□□□ 0.94
CPSF4-204ENST00000436336 OR4K17Q8NGC6 315 aa20.93■□□□□ 0.94
CPSF4-204ENST00000436336 OR1J4Q8NGS1 313 aa20.93■□□□□ 0.94
CPSF4-204ENST00000436336 MAGEE2Q8TD90 523 aaPredicted RBP20.93■□□□□ 0.94
CPSF4-204ENST00000436336 TMEM234Q8WY98 164 aa20.93■□□□□ 0.94
CPSF4-204ENST00000436336 PTGES2Q9H7Z7 377 aa20.93■□□□□ 0.94
CPSF4-204ENST00000436336 C12orf10Q9HB07 376 aa20.93■□□□□ 0.94
CPSF4-204ENST00000436336 USE1Q9NZ43 259 aa20.93■□□□□ 0.94
CPSF4-204ENST00000436336 CACNA1AO00555 2505 aa20.93■□□□□ 0.94
CPSF4-204ENST00000436336 A0A087WUU8 490 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 G3V3Y1 287 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 CDC40O60508 579 aaKnown RBP eCLIP20.92■□□□□ 0.94
CPSF4-204ENST00000436336 HPRP00739 348 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 GP1BBP13224 206 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 DNASE1L1P49184 302 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 TMPRSS3P57727 454 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 LINC00114Q6XXX2 140 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 ST8SIA1Q92185 356 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 ZNF524Q96C55 264 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 HS6ST2Q96MM7 605 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 ADAM19Q9H013 955 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 C1QTNF9BB2RNN3 333 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 ALPLP05186 524 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 C1QTNF9P0C862 333 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 PNMTP11086 282 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 ANXA8P13928 327 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 TIGD3Q6B0B8 471 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 ZNF770Q6IQ21 691 aaPredicted RBP20.92■□□□□ 0.94
CPSF4-204ENST00000436336 UNQ6494/PRO21346Q6UXR6 183 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 ZNF730Q6ZMV8 503 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 WDR88Q6ZMY6 472 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 RRM2BQ7LG56 351 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 OR4K5Q8NGD3 323 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 OR9Q2Q8NGE9 314 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 TMEM255BQ8WV15 326 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 ZNF597Q96LX8 424 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 SMAD5Q99717 465 aaKnown RBP20.92■□□□□ 0.94
CPSF4-204ENST00000436336 TACO1Q9BSH4 297 aaKnown RBP20.92■□□□□ 0.94
CPSF4-204ENST00000436336 SMURF2Q9HAU4 748 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 FBXL2Q9UKC9 423 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 CNTRLQ7Z7A1 2325 aa20.92■□□□□ 0.94
CPSF4-204ENST00000436336 A0A087WUJ7 227 aa20.91■□□□□ 0.94
CPSF4-204ENST00000436336 H0YJX3 145 aa20.91■□□□□ 0.94
CPSF4-204ENST00000436336 OR10H3O60404 316 aa20.91■□□□□ 0.94
CPSF4-204ENST00000436336 RBM34P42696 430 aaKnown RBP20.91■□□□□ 0.94
CPSF4-204ENST00000436336 ZNF41P51814 821 aaPredicted RBP20.91■□□□□ 0.94
CPSF4-204ENST00000436336 DLX5P56178 289 aa20.91■□□□□ 0.94
CPSF4-204ENST00000436336 SLC25A25Q6KCM7 469 aa20.91■□□□□ 0.94
CPSF4-204ENST00000436336 FAHD1Q6P587 224 aa20.91■□□□□ 0.94
CPSF4-204ENST00000436336 IZUMO2Q6UXV1 221 aa20.91■□□□□ 0.94
CPSF4-204ENST00000436336 GRINAQ7Z429 371 aa20.91■□□□□ 0.94
CPSF4-204ENST00000436336 ATG4DQ86TL0 474 aaPredicted RBP20.91■□□□□ 0.94
CPSF4-204ENST00000436336 RNF113BQ8IZP6 322 aaKnown RBP20.91■□□□□ 0.94
CPSF4-204ENST00000436336 TMEM239Q8WW34 195 aa20.91■□□□□ 0.94
CPSF4-204ENST00000436336 FEVQ99581 238 aa20.91■□□□□ 0.94
CPSF4-204ENST00000436336 ZNF426Q9BUY5 554 aa20.91■□□□□ 0.94
CPSF4-204ENST00000436336 DEPPQ9NTK1 212 aa20.91■□□□□ 0.94
CPSF4-204ENST00000436336 KIF17Q9P2E2 1029 aa20.91■□□□□ 0.94
CPSF4-204ENST00000436336 MPDZO75970 2070 aa20.91■□□□□ 0.94
CPSF4-204ENST00000436336 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 SP1P08047 785 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 CD46P15529 392 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 PRKCAP17252 672 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 TACR3P29371 465 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 HTR3AP46098 478 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 MBOAT2Q6ZWT7 520 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 ATG16L2Q8NAA4 619 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 C1GALT1C1Q96EU7 318 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 JSRP1Q96MG2 331 aaPredicted RBP20.9■□□□□ 0.94
CPSF4-204ENST00000436336 FAM173AQ9BQD7 235 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.9■□□□□ 0.94
CPSF4-204ENST00000436336 MED17Q9NVC6 651 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 MGAT4BQ9UQ53 548 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 KLF13Q9Y2Y9 288 aaPredicted RBP20.9■□□□□ 0.94
CPSF4-204ENST00000436336 PCDHGA9Q9Y5G4 932 aaKnown RBP20.9■□□□□ 0.94
CPSF4-204ENST00000436336 TNRC6AQ8NDV7 1962 aaKnown RBP20.9■□□□□ 0.94
CPSF4-204ENST00000436336 NCKAP5O14513 1909 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 A0A0G2JMM0 328 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 A0A1W2PPB8 328 aa20.9■□□□□ 0.94
CPSF4-204ENST00000436336 A0A1W2PRS3 328 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms