RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PPT1P50897 306 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 UBXN2BQ14CS0 331 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 C21orf62-AS1Q17RA5 79 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 GGTA1PQ4G0N0 100 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 B3GNTL1Q67FW5 361 aaPredicted RBP6.95□□□□□ -1.3
CPSF6-202ENST00000435070 GLDNQ6ZMI3 551 aaPredicted RBP6.95□□□□□ -1.3
CPSF6-202ENST00000435070 OR4Q3Q8NH05 313 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 NR4A3Q92570 626 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 FATE1Q969F0 183 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 EXOSC8Q96B26 276 aaKnown RBP6.95□□□□□ -1.3
CPSF6-202ENST00000435070 PFDN5Q99471 154 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 SLC12A9Q9BXP2 914 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 PBX4Q9BYU1 374 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 RNF208Q9H0X6 261 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 WDR13Q9H1Z4 485 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 CCDC86Q9H6F5 360 aaKnown RBP6.95□□□□□ -1.3
CPSF6-202ENST00000435070 AHSPQ9NZD4 102 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 KCNK7Q9Y2U2 307 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 TRIP12Q14669 1992 aaPredicted RBP6.95□□□□□ -1.3
CPSF6-202ENST00000435070 A0A0G2JN53 185 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 F11P03951 625 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 RPL9P32969 192 aaKnown RBP6.95□□□□□ -1.3
CPSF6-202ENST00000435070 ART1P52961 327 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 DLX5P56178 289 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 TAS2R41P59536 307 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 CLINT1Q14677 625 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 TMEM71Q6P5X7 295 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF783Q6ZMS7 281 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 HTR3DQ70Z44 454 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 NAA40Q86UY6 237 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF740Q8NDX6 193 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 THEM6Q8WUY1 208 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 CLP1Q92989 425 aaKnown RBP6.95□□□□□ -1.3
CPSF6-202ENST00000435070 RFKQ969G6 155 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 TRIM43Q96BQ3 446 aaPredicted RBP6.95□□□□□ -1.3
CPSF6-202ENST00000435070 SLC25A18Q9H1K4 315 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 TLNRD1Q9H1K6 362 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 ISYNA1Q9NPH2 558 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 DOCK4Q8N1I0 1966 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 DNAJC25-GNG10A0A024R161 153 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 A0A1B0GUH1 482 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 IRGMA1A4Y4 181 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 ARRDC5A6NEK1 342 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 F5H5P2 479 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 PAK4O96013 591 aaPredicted RBP6.94□□□□□ -1.3
CPSF6-202ENST00000435070 FURINP09958 794 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 SELLP14151 372 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 RAB4AP20338 218 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 OR12D2P58182 307 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 SMIM11AP58511 58 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 BEX3Q00994 111 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 AGTRAPQ6RW13 159 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 CRTC1Q6UUV9 634 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 RNF165Q6ZSG1 346 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF546Q86UE3 836 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 ASB11Q8WXH4 323 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 KLHL28Q9NXS3 571 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 GBF1Q92538 1859 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 A0A0G2JK05 382 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 OR2M5A3KFT3 312 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 KCNAB3O43448 404 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 SLC25A12O75746 678 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 CD53P19397 219 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 FUT1P19526 365 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 CNR1P21554 472 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 GJA5P36382 358 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 PSMD4P55036 377 aaKnown RBP6.94□□□□□ -1.3
CPSF6-202ENST00000435070 ALG11Q2TAA5 492 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 PIP5KL1Q5T9C9 394 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 SUN3Q8TAQ9 357 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 C16orf78Q8WTQ4 265 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 SUSD6Q92537 303 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 RGMAQ96B86 450 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 HAVCR1Q96D42 359 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF354BQ96LW1 612 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 RSRP1Q9BUV0 290 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 BHLHE41Q9C0J9 482 aaPredicted RBP6.94□□□□□ -1.3
CPSF6-202ENST00000435070 SLITRK2Q9H156 845 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 BRD9Q9H8M2 597 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 ELL3Q9HB65 397 aaPredicted RBP6.94□□□□□ -1.3
CPSF6-202ENST00000435070 ACSS1Q9NUB1 689 aaPredicted RBP6.94□□□□□ -1.3
CPSF6-202ENST00000435070 TMEM218A2RU14 115 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 ANKRD61A6NGH8 418 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 KDELR3O43731 214 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 OR2T1O43869 369 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 PRAF2O60831 178 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 KLK3P07288 261 aaPredicted RBP6.94□□□□□ -1.3
CPSF6-202ENST00000435070 BDKRB2P30411 391 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 STAT5AP42229 794 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 RAG2P55895 527 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 SRSF3P84103 164 aaKnown RBP6.94□□□□□ -1.3
CPSF6-202ENST00000435070 NDUFAF7Q7L592 441 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 C6orf120Q7Z4R8 191 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 IL17RCQ8NAC3 791 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 LINC01599Q8WXQ3 324 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 PPP1R16AQ96I34 528 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 HMX1Q9NP08 348 aaPredicted RBP6.94□□□□□ -1.3
CPSF6-202ENST00000435070 ASH2LQ9UBL3 628 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 LTBP3Q9NS15 1303 aa6.94□□□□□ -1.3
CPSF6-202ENST00000435070 LRRC72A6NJI9 287 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms