RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 CD1AP06126 327 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 GSTT2P0CG29 244 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 GSTT2BP0CG30 244 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 GLULP15104 373 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 FUT1P19526 365 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 S1PR1P21453 382 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 ACAA2P42765 397 aaKnown RBP9.62□□□□□ -0.87
CD44-210ENST00000434472 SLC16A1P53985 500 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 ATP12AP54707 1039 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 NRG3P56975 720 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 IGLV3-21P80748 117 aaPredicted RBP9.62□□□□□ -0.87
CD44-210ENST00000434472 HHEXQ03014 270 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 STX4Q12846 297 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 EIF2B5Q13144 721 aaKnown RBP9.62□□□□□ -0.87
CD44-210ENST00000434472 BIKQ13323 160 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 FGFBP1Q14512 234 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.62□□□□□ -0.87
CD44-210ENST00000434472 IDNKQ5T6J7 187 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 ARL9Q6T311 187 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 LINC00114Q6XXX2 140 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 THSD4Q6ZMP0 1018 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 VASH1Q7L8A9 365 aaPredicted RBP9.62□□□□□ -0.87
CD44-210ENST00000434472 LRRC28Q86X40 367 aaPredicted RBP9.62□□□□□ -0.87
CD44-210ENST00000434472 MCATQ8IVS2 390 aaKnown RBP9.62□□□□□ -0.87
CD44-210ENST00000434472 SLC44A3Q8N4M1 653 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 ZNF614Q8N883 585 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 POMGNT2Q8NAT1 580 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 OR6C4Q8NGE1 309 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 OR5M3Q8NGP4 307 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 OR51A7Q8NH64 312 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 OIT3Q8WWZ8 545 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 PATE1Q8WXA2 126 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 SGTBQ96EQ0 304 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 MSANTD3Q96H12 275 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 RBM18Q96H35 190 aaKnown RBP9.62□□□□□ -0.87
CD44-210ENST00000434472 DCLRE1CQ96SD1 692 aaKnown RBP9.62□□□□□ -0.87
CD44-210ENST00000434472 TBX5Q99593 518 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 PELOQ9BRX2 385 aaKnown RBP9.62□□□□□ -0.87
CD44-210ENST00000434472 ENKD1Q9H0I2 346 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.62□□□□□ -0.87
CD44-210ENST00000434472 ADGRL4Q9HBW9 690 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 Q9N2J8 555 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 MEPEQ9NQ76 525 aaPredicted RBP9.62□□□□□ -0.87
CD44-210ENST00000434472 FLRT3Q9NZU0 649 aa9.62□□□□□ -0.87
CD44-210ENST00000434472 TRAV27A0A087WT01 109 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 SHISA3A0PJX4 238 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 CLDN4O14493 209 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 LYRM1O43325 122 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 REM1O75628 298 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 NCR1O76036 304 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 IGHV4-34P06331 123 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 PTNP21246 168 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 NOS3P29474 1203 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 RBMS1P29558 406 aaKnown RBP9.61□□□□□ -0.87
CD44-210ENST00000434472 KIR2DL3P43628 341 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 RFX3P48380 749 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 EMDP50402 254 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 GBX2P52951 348 aaPredicted RBP9.61□□□□□ -0.87
CD44-210ENST00000434472 ACTA2P62736 377 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 ACTG2P63267 376 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 ZNF85Q03923 595 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 CRMP1Q14194 572 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 PRTGQ2VWP7 1150 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 ALG10BQ5I7T1 473 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 ZNF362Q5T0B9 420 aaPredicted RBP9.61□□□□□ -0.87
CD44-210ENST00000434472 COL13A1Q5TAT6 717 aaPredicted RBP9.61□□□□□ -0.87
CD44-210ENST00000434472 SLC22A18ASQ8N1D0 253 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 SYS1Q8N2H4 156 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 ARHGEF39Q8N4T4 335 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 OR9A4Q8NGU2 314 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 ABHD4Q8TB40 342 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 ZDHHC1Q8WTX9 485 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 RIT1Q92963 219 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 SENP5Q96HI0 755 aaPredicted RBP9.61□□□□□ -0.87
CD44-210ENST00000434472 ART5Q96L15 291 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 DGAT2Q96PD7 388 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 TNFRSF13CQ96RJ3 184 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 TIMP4Q99727 224 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 HCAR1Q9BXC0 346 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 TP63Q9H3D4 680 aaPredicted RBP9.61□□□□□ -0.87
CD44-210ENST00000434472 PRTFDC1Q9NRG1 225 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 CYSLTR2Q9NS75 346 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 EXTL2Q9UBQ6 330 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 CD207Q9UJ71 328 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 ICAM5Q9UMF0 924 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 SIRT4Q9Y6E7 314 aaPredicted RBP9.61□□□□□ -0.87
CD44-210ENST00000434472 COL4A2P08572 1712 aa9.61□□□□□ -0.87
CD44-210ENST00000434472 FAM240BA0A1B0GVZ2 78 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 ZC3H12DA2A288 527 aaKnown RBP9.6□□□□□ -0.87
CD44-210ENST00000434472 NPIPB9F8W1W9 429 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 J3QLW9 94 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 ORC5O43913 435 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 LRP4O75096 1905 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 SLC43A1O75387 559 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 YES1P07947 543 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 OR2T7P0C7T2 308 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 THEGLP0DJG4 465 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 CHRNB1P11230 501 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 ST6GAL1P15907 406 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 ZNF19P17023 458 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms