RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 BMP8AQ7Z5Y6 402 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 ABI3BPQ7Z7G0 1075 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 BPHLQ86WA6 291 aaPredicted RBP13.69□□□□□ -0.22
DDX56-205ENST00000433257 SIAH3Q8IW03 269 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 FBXL6Q8N531 539 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 POMGNT2Q8NAT1 580 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 ZNF527Q8NB42 609 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 BBS1Q8NFJ9 593 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 GIMAP1Q8WWP7 306 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 ELSPBP1Q96BH3 223 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 ZNF578Q96N58 590 aaPredicted RBP13.69□□□□□ -0.22
DDX56-205ENST00000433257 YIPF4Q9BSR8 244 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 TRPV4Q9HBA0 871 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 POLE3Q9NRF9 147 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 SLC7A7Q9UM01 511 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 PRELID1Q9Y255 219 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 WDR45Q9Y484 360 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 COL4A3Q01955 1670 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 A0A1W2PR48 441 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 K7ESM1 405 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 OGG1O15527 345 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 LANCL1O43813 399 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 SERPINI2O75830 405 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 SBK2P0C263 348 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 ADH5P11766 374 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 CMPK1P30085 196 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 SRP54P61011 504 aaKnown RBP13.69□□□□□ -0.22
DDX56-205ENST00000433257 LSM11P83369 360 aaKnown RBP eCLIP13.69□□□□□ -0.222e-6■■■□□ 16.9
DDX56-205ENST00000433257 KLF9Q13886 244 aaPredicted RBP13.69□□□□□ -0.22
DDX56-205ENST00000433257 ZSWIM7Q19AV6 140 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 TANGO2Q6ICL3 276 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 MFSD12Q6NUT3 480 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 ZCCHC12Q6PEW1 402 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 FRRS1Q6ZNA5 592 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 NR2C2APQ86WQ0 139 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 TIGD4Q8IY51 512 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 PIAS4Q8N2W9 510 aaPredicted RBP13.69□□□□□ -0.22
DDX56-205ENST00000433257 C2orf73Q8N5S3 287 aaPredicted RBP13.69□□□□□ -0.22
DDX56-205ENST00000433257 ZNF366Q8N895 744 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 MFSD9Q8NBP5 474 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 OR4C6Q8NH72 309 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 TMEM255BQ8WV15 326 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 TMEM239Q8WW34 195 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 FGF14Q92915 247 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 NECAB3Q96P71 396 aaPredicted RBP13.69□□□□□ -0.22
DDX56-205ENST00000433257 FERD3LQ96RJ6 166 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 TEAD3Q99594 435 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 TIMM29Q9BSF4 260 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 TMPRSS13Q9BYE2 586 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 NANSQ9NR45 359 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 KLHL1Q9NR64 748 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 ZNF223Q9UK11 482 aaPredicted RBP13.69□□□□□ -0.22
DDX56-205ENST00000433257 A0A0C4DFX4 3053 aa13.69□□□□□ -0.22
DDX56-205ENST00000433257 ARPC4-TTLL3A0A0A6YYG9 625 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 A0A1B0GW55 424 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 RPS10-NUDT3A0A1W2PQS6 291 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 ANTXRLA6NF34 631 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 TRABD2BA6NFA1 517 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 LCMT2O60294 686 aaKnown RBP13.68□□□□□ -0.22
DDX56-205ENST00000433257 DUX4L2P0CJ85 424 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 DUX4L3P0CJ86 424 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 DUX4L4P0CJ87 422 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 DUX4L5P0CJ88 424 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 DUX4L6P0CJ89 424 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 DUX4L7P0CJ90 424 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 UBL4AP11441 157 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 PTGS2P35354 604 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 VIPR2P41587 438 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 MC3RP41968 323 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 CCR9P51686 369 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 RAP2BP61225 183 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 LGALS3BPQ08380 585 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 HTR4Q13639 388 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 FGFBP1Q14512 234 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 MFSD13AQ14CX5 517 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 SUZ12Q15022 739 aaKnown RBP13.68□□□□□ -0.22
DDX56-205ENST00000433257 AGERQ15109 404 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 FNDC3BQ53EP0 1204 aaKnown RBP13.68□□□□□ -0.22
DDX56-205ENST00000433257 RPL22L1Q6P5R6 122 aaKnown RBP13.68□□□□□ -0.22
DDX56-205ENST00000433257 KIAA1324Q6UXG2 1013 aaKnown RBP13.68□□□□□ -0.22
DDX56-205ENST00000433257 YAF2Q8IY57 180 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 SIX5Q8N196 739 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 LRRC25Q8N386 305 aaPredicted RBP13.68□□□□□ -0.22
DDX56-205ENST00000433257 TMEM99Q8N816 258 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 LMNTD1Q8N9Z9 388 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 KISS1RQ969F8 398 aaPredicted RBP13.68□□□□□ -0.22
DDX56-205ENST00000433257 DACT3Q96B18 629 aaPredicted RBP13.68□□□□□ -0.22
DDX56-205ENST00000433257 C16orf58Q96GQ5 468 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 ZNF681Q96N22 645 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 KXD1Q9BQD3 176 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 DUX4Q9UBX2 424 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 FBXL3Q9UKT7 428 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 GPR55Q9Y2T6 319 aaPredicted RBP13.68□□□□□ -0.22
DDX56-205ENST00000433257 MED31Q9Y3C7 131 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 HEBP2Q9Y5Z4 205 aa13.68□□□□□ -0.22
DDX56-205ENST00000433257 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.67□□□□□ -0.22
DDX56-205ENST00000433257 SNRPGP15A8MWD9 76 aa13.67□□□□□ -0.22
DDX56-205ENST00000433257 GABARAPH6UMI1 98 aa13.67□□□□□ -0.22
DDX56-205ENST00000433257 ZNF593O00488 134 aaPredicted RBP13.67□□□□□ -0.22
DDX56-205ENST00000433257 LDOC1O95751 146 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms